RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 IGHV4-39P01824 125 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 TWIST1Q15672 202 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 MOB4Q9Y3A3 225 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.97□□□□□ -1.13
LSG1-201ENST00000265245 H3BUT2 72 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 ZNF80P51504 273 aaPredicted RBP7.97□□□□□ -1.13
LSG1-201ENST00000265245 TMEM219Q86XT9 240 aa7.97□□□□□ -1.13
LSG1-201ENST00000265245 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.96□□□□□ -1.13
LSG1-201ENST00000265245 USP24Q9UPU5 2620 aa7.96□□□□□ -1.13
LSG1-201ENST00000265245 IGHV3OR16-13A0A075B7E8 117 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 IGHV3OR16-10A0A075B7F0 116 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 IGHV3-74A0A0B4J1X5 117 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 LOC389332A0A1B0GUA5 103 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 CLPSL1A2RUU4 121 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 IFI27P40305 119 aaPredicted RBP7.96□□□□□ -1.14
LSG1-201ENST00000265245 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.14
LSG1-201ENST00000265245 RNF182Q8N6D2 247 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 PIMREGQ9BSJ6 248 aa7.96□□□□□ -1.14
LSG1-201ENST00000265245 TRAV41A0A0B4J266 112 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 IGLC6P0CF74 106 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 CKS2P33552 79 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 PAX8Q06710 450 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 ERCC8Q13216 396 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 ZNF747Q9BV97 191 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 U3KQK5 164 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 ASH1LQ9NR48 2969 aaKnown RBP7.95□□□□□ -1.14
LSG1-201ENST00000265245 IGHV1-69DA0A0B4J2H0 117 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 TEX48A0A1B0GUV7 120 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 hDV102S1A0JD36 115 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 PRAC2D3DTV9 90 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 TAX1BP3O14907 124 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 IGHV1-69P01742 117 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 MRPL51Q4U2R6 128 aaKnown RBP7.95□□□□□ -1.14
LSG1-201ENST00000265245 SIGLEC8Q9NYZ4 499 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 IGHV3-49A0A0A0MS15 119 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 ARL3P36405 182 aa7.95□□□□□ -1.14
LSG1-201ENST00000265245 CSMD1Q96PZ7 3565 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 TRAV40A0A0B4J280 105 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 K7EMI3 77 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 TMEM78Q5T7P6 136 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 FAM223AQ8IWN6 122 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 LINC01545Q5VT33 79 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 SLC25A34Q6PIV7 304 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 BRD3OSQ6XYD6 125 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 TRGV3P03979 118 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 LINC01559Q495D7 138 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 IL17RELQ6ZVW7 336 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 MRPL53Q96EL3 112 aaKnown RBP7.94□□□□□ -1.14
LSG1-201ENST00000265245 CCL19Q99731 98 aa7.94□□□□□ -1.14
LSG1-201ENST00000265245 IGHV4-61A0A0C4DH41 118 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 C8orf86Q6ZUL3 223 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 MS4A6AQ9H2W1 248 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 LINC00527Q9UJ94 153 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 G3V4G9 280 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 RNF183Q96D59 192 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 CNFNQ9BYD5 112 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
LSG1-201ENST00000265245 OR8A1Q8NGG7 326 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 TRBV7-9A0A0J9YWB2 115 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 HBDP02042 147 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 HIST1H1AQ02539 215 aaPredicted RBP7.92□□□□□ -1.14
LSG1-201ENST00000265245 FAM106AQ4KMX7 169 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 SVEP1Q4LDE5 3571 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 SMKR1H3BMG3 65 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 CRIP2P52943 208 aaPredicted RBP7.92□□□□□ -1.14
LSG1-201ENST00000265245 LOXL1Q08397 574 aaPredicted RBP7.92□□□□□ -1.14
LSG1-201ENST00000265245 C16orf92Q96LL3 132 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 U3KQE9 123 aa7.92□□□□□ -1.14
LSG1-201ENST00000265245 PKD1L2Q7Z442 2459 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 TRAV8-2A0A0B4J237 113 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 NCR2O95944 276 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 NPYP01303 97 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 FOXE3Q13461 319 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 C10orf105Q8TEF2 133 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 C7orf71A4D174 169 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 PPIFP30405 207 aaKnown RBP7.91□□□□□ -1.14
LSG1-201ENST00000265245 MAP1LC3AQ9H492 121 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 MSRB1Q9NZV6 116 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 UFC1Q9Y3C8 167 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 A0A096LNJ9 63 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 C19orf54Q5BKX5 351 aa7.91□□□□□ -1.14
LSG1-201ENST00000265245 C9orf139Q6ZV77 190 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 SCRT2Q9NQ03 307 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 IGF1P05019 195 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 LY6EQ16553 131 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 C9orf47Q6ZRZ4 202 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 SH2D6Q7Z4S9 175 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 ZNF575Q86XF7 245 aa7.9□□□□□ -1.14
LSG1-201ENST00000265245 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.15
LSG1-201ENST00000265245 M0QXV9 152 aa7.9□□□□□ -1.15
LSG1-201ENST00000265245 IGHV4-38-2P0DP08 117 aa7.9□□□□□ -1.15
LSG1-201ENST00000265245 HSD52Q0P140 79 aa7.89□□□□□ -1.15
LSG1-201ENST00000265245 GLMPQ8WWB7 406 aa7.89□□□□□ -1.15
LSG1-201ENST00000265245 RNF185Q96GF1 192 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms