RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 FOXE3Q13461 319 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 TWIST1Q15672 202 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 NRACQ8N912 160 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 KLK15Q9H2R5 256 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 FBN2P35556 2912 aa8.45□□□□□ -1.06
MSH3-201ENST00000265081 IGHV3-66A0A0C4DH42 116 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 A0A0G2JLM5 398 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 NCR2O95944 276 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 MSRB1Q9NZV6 116 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 IGSF10Q6WRI0 2623 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 TCAPO15273 167 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 BLCAPP62952 87 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 CR1P17927 2039 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 TMSB15BA0A087X1C1 80 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 COL5A1-AS1Q5SY13 56 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 Q6ZN92 141 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 HBDP02042 147 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 OR4X2Q8NGF9 303 aa8.44□□□□□ -1.06
MSH3-201ENST00000265081 CSMD2Q7Z408 3487 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 FGF6P10767 208 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 HNRNPA3P51991 378 aaKnown RBP8.43□□□□□ -1.06
MSH3-201ENST00000265081 PKD1L2Q7Z442 2459 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 SAMD13Q5VXD3 122 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 STPG4Q8N801 248 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 PRSS3P2Q8NHM4 247 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 ORM1P02763 201 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 OR1N2Q8NGR9 330 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 LINC00527Q9UJ94 153 aa8.43□□□□□ -1.06
MSH3-201ENST00000265081 PRSS57Q6UWY2 283 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
MSH3-201ENST00000265081 KLLNB2CW77 178 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 ZNF207O43670 478 aaKnown RBP8.42□□□□□ -1.06
MSH3-201ENST00000265081 GAS8-AS1O95177 125 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 CKS2P33552 79 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 DAZ1Q9NQZ3 744 aaKnown RBP8.42□□□□□ -1.06
MSH3-201ENST00000265081 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 LRRC75A-AS1Q8N1F1 130 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 Q8N8P6 123 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 TPPP3Q9BW30 176 aa8.42□□□□□ -1.06
MSH3-201ENST00000265081 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 COX8AP10176 69 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 Q6ZQT7 251 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 Q8N2B8 174 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 DLEU1O43261 78 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 LY6EQ16553 131 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 PMCHL2Q9BQD1 86 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 CSN3P07498 182 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 FCER1GP30273 86 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 TMEM208Q9BTX3 173 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
MSH3-201ENST00000265081 PEF1Q9UBV8 284 aaKnown RBP8.41□□□□□ -1.06
MSH3-201ENST00000265081 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 LGALS9O00182 355 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 C2orf91Q6ZV80 131 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 DEFB112Q30KQ8 113 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 Q6YL49 198 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 DOPEY1Q5JWR5 2465 aa8.4□□□□□ -1.06
MSH3-201ENST00000265081 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 OR8A1Q8NGG7 326 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
MSH3-201ENST00000265081 TRAV21A0A0B4J279 112 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 ORAOV1Q8WV07 137 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 M0R381 172 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 RHPN1-AS1Q9BWJ2 59 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 BEX4Q9NWD9 120 aaPredicted RBP8.39□□□□□ -1.07
MSH3-201ENST00000265081 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 CHD8Q9HCK8 2581 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 K7EMI3 77 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 ZNF843Q8N446 348 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 ZNF738Q8NE65 137 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 OR2K2Q8NGT1 345 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
MSH3-201ENST00000265081 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 MUC21A0A140T8X8 626 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 IGHV4-59P01825 116 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 KRTAP1-3Q8IUG1 177 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 ZNF702PQ9H963 129 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 RPL32P62910 135 aaKnown RBP8.38□□□□□ -1.07
MSH3-201ENST00000265081 ABCA1O95477 2261 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 SIVA1O15304 175 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 RNASE3P12724 160 aaKnown RBP8.38□□□□□ -1.07
MSH3-201ENST00000265081 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 BOD1L2Q8IYS8 172 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 NRGNQ92686 78 aa8.38□□□□□ -1.07
MSH3-201ENST00000265081 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms