RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 HAX1O00165 279 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 HILS1P60008 231 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 DPF1Q92782 380 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 LINC00477Q96M19 166 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 TP53TG3Q9ULZ0 132 aa11.91□□□□□ -0.5
VPS26A-201ENST00000263559 A0A1B0GUT8 65 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 ORM1P02763 201 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 TFPI2P48307 235 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 ADAMTSL5Q6ZMM2 481 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 LINC01006Q8NI28 216 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 NUPR1O60356 82 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 ID1P41134 155 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 OR8A1Q8NGG7 326 aa11.9□□□□□ -0.5
VPS26A-201ENST00000263559 SRIP30626 198 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 SRSF2Q01130 221 aaKnown RBP11.89□□□□□ -0.51
VPS26A-201ENST00000263559 HIST1H1AQ02539 215 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-201ENST00000263559 Q6AWC8 147 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 LYZL1Q6UWQ5 148 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 OR10D4PQ8NGN7 298 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 C16orf95Q9H693 158 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 F2Z2F3 143 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 C12orf57Q99622 126 aa11.89□□□□□ -0.51
VPS26A-201ENST00000263559 CD28P10747 220 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 RPS20P60866 119 aaKnown RBP11.88□□□□□ -0.51
VPS26A-201ENST00000263559 Q0VG73 95 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 PRR9Q5T870 116 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 Q6ZQT7 251 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 AMBPP02760 352 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
VPS26A-201ENST00000263559 LINC00310P59036 64 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 RIGQ13278 110 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
VPS26A-201ENST00000263559 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 K7EQG2 157 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 M0QZ24 198 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 SSTP61278 116 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 BAGE3Q86Y29 109 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 WFDC12Q8WWY7 111 aa11.87□□□□□ -0.51
VPS26A-201ENST00000263559 J3KRW8 73 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 ZNF688P0C7X2 276 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 ZFAND2AQ8N6M9 145 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 PACRGQ96M98 296 aaPredicted RBP11.86□□□□□ -0.51
VPS26A-201ENST00000263559 A0A1W2PRX2 142 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 SERF1AO75920 110 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 FER1L6-AS1Q8NA97 138 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 FAM19A4Q96LR4 140 aa11.86□□□□□ -0.51
VPS26A-201ENST00000263559 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 OR10J3Q5JRS4 329 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 PSMG4Q5JS54 123 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 RAX2Q96IS3 184 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 PEMTQ9UBM1 199 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 SMIM6P0DI80 62 aa11.85□□□□□ -0.51
VPS26A-201ENST00000263559 ALKBH7Q9BT30 221 aaPredicted RBP11.85□□□□□ -0.51
VPS26A-201ENST00000263559 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
VPS26A-201ENST00000263559 A0A1B0GW15 77 aa11.84□□□□□ -0.51
VPS26A-201ENST00000263559 CTRLP40313 264 aa11.84□□□□□ -0.51
VPS26A-201ENST00000263559 SNRPD3P62318 126 aaKnown RBP11.84□□□□□ -0.51
VPS26A-201ENST00000263559 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
VPS26A-201ENST00000263559 TMEM18Q96B42 140 aa11.84□□□□□ -0.51
VPS26A-201ENST00000263559 INAFM1C9JVW0 142 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 CSN3P07498 182 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 CD33P20138 364 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 KIR3DS1Q14943 382 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 IQCJQ1A5X6 159 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 GATD1Q8NB37 220 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 RCHY1Q96PM5 261 aa11.83□□□□□ -0.51
VPS26A-201ENST00000263559 GPX1P07203 203 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 ESDP10768 282 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 PYY3Q5JQD4 70 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 JMJD8Q96S16 334 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 SORL1Q92673 2214 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 LOC102724200A0A096LPH7 203 aaPredicted RBP11.83□□□□□ -0.52
VPS26A-201ENST00000263559 PAFAH1B2P68402 229 aa11.83□□□□□ -0.52
VPS26A-201ENST00000263559 TSSC4Q9Y5U2 329 aaPredicted RBP11.82□□□□□ -0.52
VPS26A-201ENST00000263559 SETD2Q9BYW2 2564 aaPredicted RBP11.82□□□□□ -0.52
VPS26A-201ENST00000263559 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
VPS26A-201ENST00000263559 NTF3P20783 257 aa11.82□□□□□ -0.52
VPS26A-201ENST00000263559 RNASE4P34096 147 aaKnown RBP11.82□□□□□ -0.52
VPS26A-201ENST00000263559 ZNF493Q6ZR52 646 aa11.82□□□□□ -0.52
VPS26A-201ENST00000263559 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
VPS26A-201ENST00000263559 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
VPS26A-201ENST00000263559 AGRNO00468 2067 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 CCL24O00175 119 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 NDUFA7O95182 113 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 FHL3Q13643 280 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 TRAV21A0A0B4J279 112 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 A0A0J9YX75 114 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 TWIST1Q15672 202 aa11.81□□□□□ -0.52
VPS26A-201ENST00000263559 MSRB1Q9NZV6 116 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms