RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TMEM158Q8WZ71 300 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 RNF185Q96GF1 192 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 ODF3BA8MYP8 253 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 PDE6HQ13956 83 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 Q8N9W7 124 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 AGPAT4-IT1Q9H0P7 198 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 MYO18BQ8IUG5 2567 aa7.05□□□□□ -1.28
MSH4-201ENST00000263187 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 BMI1P35226 326 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 SAA4P35542 130 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 PAX2Q02962 417 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 DTX2Q86UW9 622 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 MAP1LC3AQ9H492 121 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 PEF1Q9UBV8 284 aaKnown RBP7.04□□□□□ -1.28
MSH4-201ENST00000263187 IGKV3D-20A0A0C4DH25 116 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 SMAD7O15105 426 aaKnown RBP7.04□□□□□ -1.28
MSH4-201ENST00000263187 EFNA4P52798 201 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 BRD3OSQ6XYD6 125 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 PRORYQ9H606 182 aa7.04□□□□□ -1.28
MSH4-201ENST00000263187 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 A0A1B0GW15 77 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 IGHV3-11P01762 117 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 SRD5A1P18405 259 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 FCER1GP30273 86 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 HIF1ANQ9NWT6 349 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 CFAP46Q8IYW2 2715 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 H3BVH4 76 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 M0R381 172 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 UCNP55089 124 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 ZFYVE26Q68DK2 2539 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 A0A0G2JLM5 398 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 BUB3O43684 328 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 IGLC6P0CF74 106 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 LY6DQ14210 128 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 LY6EQ16553 131 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 SPANXN1Q5VSR9 72 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 MTURNQ8N3F0 131 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 CCDC140Q96MF4 163 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 SRSF8Q9BRL6 282 aaKnown RBP7.03□□□□□ -1.28
MSH4-201ENST00000263187 MEGF9Q9H1U4 602 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 U3KQK5 164 aa7.03□□□□□ -1.28
MSH4-201ENST00000263187 KMT2BQ9UMN6 2715 aaPredicted RBP7.02□□□□□ -1.29
MSH4-201ENST00000263187 TRBV12-3P01733 135 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 LGALS9BQ3B8N2 356 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 S100A7AQ86SG5 101 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 BOD1L2Q8IYS8 172 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 BPESC1Q9GZL8 116 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 SETD2Q9BYW2 2564 aaPredicted RBP7.02□□□□□ -1.29
MSH4-201ENST00000263187 F6UB75 175 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 M0R1W7 72 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 CDKN1BP46527 198 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 FXYD2P54710 66 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 AGRNO00468 2067 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 GOSR1O95249 250 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 PAX8Q06710 450 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 TMEM78Q5T7P6 136 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 OR2K2Q8NGT1 345 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 ZNF502Q8TBZ5 544 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 C16orf92Q96LL3 132 aa7.02□□□□□ -1.29
MSH4-201ENST00000263187 FAM208BQ5VWN6 2430 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 CLPSL1A2RUU4 121 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 PRR9Q5T870 116 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 C8orf86Q6ZUL3 223 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 NEGR1Q7Z3B1 354 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
MSH4-201ENST00000263187 TLN2Q9Y4G6 2542 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 A6NDN8 102 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 SMIM17P0DL12 118 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 ADAMTSL5Q6ZMM2 481 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 ZFAND3Q9H8U3 227 aa7.01□□□□□ -1.29
MSH4-201ENST00000263187 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
MSH4-201ENST00000263187 USP9XQ93008 2570 aaPredicted RBP7.01□□□□□ -1.29
MSH4-201ENST00000263187 TRAV8-2A0A0B4J237 113 aa7□□□□□ -1.29
MSH4-201ENST00000263187 ODF1Q14990 250 aa7□□□□□ -1.29
MSH4-201ENST00000263187 SFTA2Q6UW10 78 aa7□□□□□ -1.29
MSH4-201ENST00000263187 Q8N6K4 173 aa7□□□□□ -1.29
MSH4-201ENST00000263187 GATD1Q8NB37 220 aa7□□□□□ -1.29
MSH4-201ENST00000263187 C9orf118A6NHY6 69 aa7□□□□□ -1.29
MSH4-201ENST00000263187 SEC11AP67812 179 aa7□□□□□ -1.29
MSH4-201ENST00000263187 UNQ9165/PRO28630Q6UXU0 137 aa7□□□□□ -1.29
MSH4-201ENST00000263187 SPCS1Q9Y6A9 102 aa7□□□□□ -1.29
MSH4-201ENST00000263187 RPS20P60866 119 aaKnown RBP7□□□□□ -1.29
MSH4-201ENST00000263187 RPL24P83731 157 aaKnown RBP7□□□□□ -1.29
MSH4-201ENST00000263187 C11orf71Q6IPW1 123 aa7□□□□□ -1.29
MSH4-201ENST00000263187 MAPKAPK5-AS1Q8N8E1 139 aa7□□□□□ -1.29
MSH4-201ENST00000263187 ACACBO00763 2458 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 MYO9AB2RTY4 2548 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 SCGB2A1O75556 95 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 IGKCP01834 107 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 MGPP08493 103 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 EMP1P54849 157 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 HSD52Q0P140 79 aa6.99□□□□□ -1.29
MSH4-201ENST00000263187 C20orf173Q96LM9 149 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms