RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 C7orf71A4D174 169 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 J3KRW8 73 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 RBX1P62877 108 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 NAA38Q9BRA0 125 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-201ENST00000261789 ABCA2Q9BZC7 2435 aa12.55□□□□□ -0.4
TM9SF1-201ENST00000261789 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
TM9SF1-201ENST00000261789 SPRY2O43597 315 aa12.55□□□□□ -0.4
TM9SF1-201ENST00000261789 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
TM9SF1-201ENST00000261789 TTTY13Q9BZ97 58 aa12.55□□□□□ -0.4
TM9SF1-201ENST00000261789 K7EP13 123 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 NPFFO15130 113 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 IGF1P05019 195 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 EFNA4P52798 201 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 METTL26Q96S19 204 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 SMAD7O15105 426 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 DEFB1P60022 68 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 C5orf56Q8N8D9 126 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
TM9SF1-201ENST00000261789 SRSF2Q01130 221 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 TMEM78Q5T7P6 136 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 BRD3OSQ6XYD6 125 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 SLC50A1Q9BRV3 221 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 C19orf84I3L1E1 186 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 S100A7P31151 101 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 UFC1Q9Y3C8 167 aa12.53□□□□□ -0.4
TM9SF1-201ENST00000261789 IGKV2D-26A0A0A0MRZ7 120 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 IGHV7-4-1A0A0J9YVY3 117 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 RBAKDNA6NC62 111 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 PPBPP02775 128 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 PRSS1P07477 247 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 RAB9AP51151 201 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 RNF151Q2KHN1 245 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 TM4SF20Q53R12 229 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 TMEM158Q8WZ71 300 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 DPF1Q92782 380 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 SPG11Q96JI7 2443 aa12.52□□□□□ -0.4
TM9SF1-201ENST00000261789 A1L4Q6 167 aa12.52□□□□□ -0.41
TM9SF1-201ENST00000261789 TRBV12-3P01733 135 aa12.52□□□□□ -0.41
TM9SF1-201ENST00000261789 PRR9Q5T870 116 aa12.52□□□□□ -0.41
TM9SF1-201ENST00000261789 FCER1GP30273 86 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 ATP5G2Q06055 141 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 TRBV7-1A0A0A6YYK4 115 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 ODF1Q14990 250 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 UNQ9165/PRO28630Q6UXU0 137 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 RAB37Q96AX2 223 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 C16orf92Q96LL3 132 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 PRORYQ9H606 182 aa12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 PEF1Q9UBV8 284 aaKnown RBP12.51□□□□□ -0.41
TM9SF1-201ENST00000261789 ADAMTSL5Q6ZMM2 481 aa12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 SEC11AP67812 179 aa12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 FOXC2Q99958 501 aa12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 HHLA3Q9XRX5 114 aa12.5□□□□□ -0.41
TM9SF1-201ENST00000261789 TRAV41A0A0B4J266 112 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 H3BVH4 76 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 KLK9Q2XQG4 91 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 KLK9Q9UKQ9 250 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 SPANXN1Q5VSR9 72 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
TM9SF1-201ENST00000261789 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 LINC01546A6NGU7 62 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 U3KQE9 123 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 GAGE12BA1L429 117 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 H3BUT2 72 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 C9orf47Q6ZRZ4 202 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 NRACQ8N912 160 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 PIFOQ8TCI5 191 aa12.48□□□□□ -0.41
TM9SF1-201ENST00000261789 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 SMIM17P0DL12 118 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 LY6EQ16553 131 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 Q8N8P6 123 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 UTP20O75691 2785 aaKnown RBP12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 TRAV40A0A0B4J280 105 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 ARL3P36405 182 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
TM9SF1-201ENST00000261789 IGHV4-39P01824 125 aa12.46□□□□□ -0.41
TM9SF1-201ENST00000261789 HSD52Q0P140 79 aa12.46□□□□□ -0.41
TM9SF1-201ENST00000261789 GPHB5Q86YW7 130 aa12.46□□□□□ -0.41
TM9SF1-201ENST00000261789 ITLN2Q8WWU7 325 aaPredicted RBP12.46□□□□□ -0.41
TM9SF1-201ENST00000261789 TMEM160Q9NX00 188 aa12.46□□□□□ -0.41
TM9SF1-201ENST00000261789 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.424e-7■■■■■ 29.1
TM9SF1-201ENST00000261789 TMEM8BA6NDV4 472 aa12.46□□□□□ -0.42
TM9SF1-201ENST00000261789 GLMPQ8WWB7 406 aa12.46□□□□□ -0.42
TM9SF1-201ENST00000261789 ZMAT4Q9H898 229 aa12.46□□□□□ -0.42
TM9SF1-201ENST00000261789 MOB4Q9Y3A3 225 aa12.46□□□□□ -0.42
TM9SF1-201ENST00000261789 A6NDN8 102 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 K7EMI3 77 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 IGKCP01834 107 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 CDKN1BP46527 198 aa12.45□□□□□ -0.42
TM9SF1-201ENST00000261789 SMIM15Q7Z3B0 74 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms