RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 C8orf86Q6ZUL3 223 aa13.46□□□□□ -0.25
SSB-201ENST00000260956 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 IGLC6P0CF74 106 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 PMCHP20382 165 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 KRTAP24-1Q3LI83 254 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 Q6YL49 198 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 REC114Q7Z4M0 266 aa13.45□□□□□ -0.26
SSB-201ENST00000260956 ZNF418Q8TF45 676 aaPredicted RBP13.45□□□□□ -0.26
SSB-201ENST00000260956 IGHV3OR16-13A0A075B7E8 117 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 IGHV3-74A0A0B4J1X5 117 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 SOCS3O14543 225 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 HOXA3O43365 443 aaPredicted RBP13.44□□□□□ -0.26
SSB-201ENST00000260956 FAM209BQ5JX69 171 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 FAM19A2Q8N3H0 131 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 IGHV4-59P01825 116 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 ERCC8Q13216 396 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 RIGQ13278 110 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 SCGB2A2Q13296 93 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 PPP1R14DQ9NXH3 145 aa13.44□□□□□ -0.26
SSB-201ENST00000260956 TMEM189A5PLL7 270 aa13.43□□□□□ -0.26
SSB-201ENST00000260956 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
SSB-201ENST00000260956 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
SSB-201ENST00000260956 AGPAT4-IT1Q9H0P7 198 aa13.43□□□□□ -0.26
SSB-201ENST00000260956 C3orf79P0CE67 100 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 KRTAP21-3Q3LHN1 58 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 C20orf144Q9BQM9 153 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 NDUFAF3Q9BU61 184 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 CNFNQ9BYD5 112 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 LINC01559Q495D7 138 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 C9orf47Q6ZRZ4 202 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 U3KQK5 164 aa13.42□□□□□ -0.26
SSB-201ENST00000260956 M0QZ24 198 aa13.41□□□□□ -0.26
SSB-201ENST00000260956 RPS20P60866 119 aaKnown RBP13.41□□□□□ -0.26
SSB-201ENST00000260956 CHCHD1Q96BP2 118 aaKnown RBP13.41□□□□□ -0.26
SSB-201ENST00000260956 C20orf173Q96LM9 149 aa13.41□□□□□ -0.26
SSB-201ENST00000260956 C2orf70A6NJV1 201 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 BMI1P35226 326 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 DEFA6Q01524 100 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 TMEM95Q3KNT9 176 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 EBLN2Q6P2I7 272 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 RNASEKQ6P5S7 137 aaKnown RBP13.4□□□□□ -0.26
SSB-201ENST00000260956 LCNL1Q6ZST4 164 aa13.4□□□□□ -0.26
SSB-201ENST00000260956 TMSB15BA0A087X1C1 80 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 TMEM213A2RRL7 107 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 HSBP1O75506 76 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 IGHV3-11P01762 117 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 PF4V1P10720 104 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 PSMB8P28062 276 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 KRTDAPP60985 99 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.39□□□□□ -0.27
SSB-201ENST00000260956 OR4X2Q8NGF9 303 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 CLEC5AQ9NY25 188 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 C11orf21Q9P2W6 132 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 FAM181BA6NEQ2 426 aa13.39□□□□□ -0.27
SSB-201ENST00000260956 ZNF705DP0CH99 300 aaPredicted RBP13.39□□□□□ -0.27
SSB-201ENST00000260956 ZNF705BP0CI00 300 aaPredicted RBP13.39□□□□□ -0.27
SSB-201ENST00000260956 NTF3P20783 257 aa13.38□□□□□ -0.27
SSB-201ENST00000260956 ZNF138P52744 262 aa13.38□□□□□ -0.27
SSB-201ENST00000260956 IGHV1-24A0A0C4DH33 117 aa13.37□□□□□ -0.27
SSB-201ENST00000260956 TMEM89A2RUT3 159 aa13.37□□□□□ -0.27
SSB-201ENST00000260956 FABP5P3A8MUU1 101 aa13.37□□□□□ -0.27
SSB-201ENST00000260956 RNASE1P07998 156 aaKnown RBP13.37□□□□□ -0.27
SSB-201ENST00000260956 FER1L6-AS1Q8NA97 138 aa13.37□□□□□ -0.27
SSB-201ENST00000260956 NPFFR1Q9GZQ6 430 aa13.37□□□□□ -0.27
SSB-201ENST00000260956 A0A0G2JLM5 398 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 FAM104BQ5XKR9 115 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 SPATA12Q7Z6I5 190 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 MYOZ3Q8TDC0 251 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 JMJD8Q96S16 334 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 M0R2Z0 102 aa13.36□□□□□ -0.27
SSB-201ENST00000260956 HIST1H1AQ02539 215 aaPredicted RBP13.36□□□□□ -0.27
SSB-201ENST00000260956 IGHV7-4-1A0A0J9YVY3 117 aa13.35□□□□□ -0.27
SSB-201ENST00000260956 PRR9Q5T870 116 aa13.35□□□□□ -0.27
SSB-201ENST00000260956 LENEPQ9Y5L5 61 aa13.35□□□□□ -0.27
SSB-201ENST00000260956 ANK2Q01484 3957 aa13.35□□□□□ -0.27
SSB-201ENST00000260956 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
SSB-201ENST00000260956 LINC00614P0C842 121 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 C10orf99Q6UWK7 81 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 TMEM86BQ8N661 226 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 TMEM158Q8WZ71 300 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 BORCS7Q96B45 105 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 TPPP3Q9BW30 176 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
SSB-201ENST00000260956 K7EMT4 169 aa13.33□□□□□ -0.27
SSB-201ENST00000260956 LINC00173Q6ZV60 143 aa13.33□□□□□ -0.27
SSB-201ENST00000260956 AMN1Q8IY45 258 aa13.33□□□□□ -0.27
SSB-201ENST00000260956 C16orf92Q96LL3 132 aa13.33□□□□□ -0.27
SSB-201ENST00000260956 VAMP8Q9BV40 100 aa13.33□□□□□ -0.27
SSB-201ENST00000260956 PMCHL1Q16048 86 aa13.33□□□□□ -0.28
SSB-201ENST00000260956 MRPL51Q4U2R6 128 aaKnown RBP13.33□□□□□ -0.28
SSB-201ENST00000260956 TMEM78Q5T7P6 136 aa13.33□□□□□ -0.28
SSB-201ENST00000260956 ZFAND2AQ8N6M9 145 aa13.33□□□□□ -0.28
SSB-201ENST00000260956 RNF185Q96GF1 192 aa13.33□□□□□ -0.28
SSB-201ENST00000260956 ZNF702PQ9H963 129 aa13.33□□□□□ -0.28
SSB-201ENST00000260956 PEF1Q9UBV8 284 aaKnown RBP13.33□□□□□ -0.28
SSB-201ENST00000260956 SMPXQ9UHP9 88 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms