RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 IZUMO1RA6ND01 250 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 SH2D1AO60880 128 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 CRIP1P50238 77 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 DEFB1P60022 68 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 C12orf54Q6X4T0 127 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 TSKUQ8WUA8 353 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 MAP6D1Q9H9H5 199 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 SORL1Q92673 2214 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 A0A1W2PPQ1 181 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 XKRY2A2RUG3 117 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 CRISP2P16562 243 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 LEPP41159 167 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 C9orf66Q5T8R8 295 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
HLA-F-216ENST00000259951 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
HLA-F-216ENST00000259951 CD33P20138 364 aa12.47□□□□□ -0.41
HLA-F-216ENST00000259951 TSPOP30536 169 aa12.47□□□□□ -0.41
HLA-F-216ENST00000259951 FAM3BP58499 235 aaPredicted RBP12.47□□□□□ -0.41
HLA-F-216ENST00000259951 FAM210BQ96KR6 192 aa12.47□□□□□ -0.41
HLA-F-216ENST00000259951 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
HLA-F-216ENST00000259951 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
HLA-F-216ENST00000259951 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 FAM231BA6NCW3 169 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 GPX1P07203 203 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 RAB5AP20339 215 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 ZNF80P51504 273 aaPredicted RBP12.46□□□□□ -0.41
HLA-F-216ENST00000259951 RPS20P60866 119 aaKnown RBP12.46□□□□□ -0.41
HLA-F-216ENST00000259951 GDF5OSQ5U4N7 250 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 ZFAND2AQ8N6M9 145 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 NAT8BQ9UHF3 227 aa12.46□□□□□ -0.41
HLA-F-216ENST00000259951 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 HLA-DRB4P13762 266 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 FAM110AQ9BQ89 295 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
HLA-F-216ENST00000259951 CA1P00915 261 aaPredicted RBP12.44□□□□□ -0.42
HLA-F-216ENST00000259951 CXCL1P09341 107 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 ACTL10Q5JWF8 245 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 TRAV21A0A0B4J279 112 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 ORM1P02763 201 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 WFDC9Q8NEX5 89 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 SPATA3Q8NHX4 192 aa12.44□□□□□ -0.42
HLA-F-216ENST00000259951 TENM1Q9UKZ4 2725 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 KNCNA6PVL3 124 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 A8MTW9 85 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 KLLNB2CW77 178 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 H3BMM0 161 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 TYMSP04818 313 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 TCL1AP56279 114 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 BEAN1Q3B7T3 259 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 ODF3L2Q3SX64 289 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 LINC01559Q495D7 138 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 Q6AWC8 147 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 NEU1Q99519 415 aa12.43□□□□□ -0.42
HLA-F-216ENST00000259951 AGRNO00468 2067 aa12.42□□□□□ -0.42
HLA-F-216ENST00000259951 LOC105371267A0A1B0GV96 52 aa12.42□□□□□ -0.42
HLA-F-216ENST00000259951 HIGD1CA8MV81 97 aa12.42□□□□□ -0.42
HLA-F-216ENST00000259951 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
HLA-F-216ENST00000259951 CLUHP3Q96NS8 147 aa12.42□□□□□ -0.42
HLA-F-216ENST00000259951 J3KRW8 73 aa12.41□□□□□ -0.42
HLA-F-216ENST00000259951 IGKV3-20P01619 116 aa12.41□□□□□ -0.42
HLA-F-216ENST00000259951 CDKN1BP46527 198 aa12.41□□□□□ -0.42
HLA-F-216ENST00000259951 RPS10P46783 165 aaKnown RBP12.41□□□□□ -0.42
HLA-F-216ENST00000259951 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
HLA-F-216ENST00000259951 COX19Q49B96 90 aa12.41□□□□□ -0.42
HLA-F-216ENST00000259951 PRR9Q5T870 116 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 AMTNQ6UX39 209 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 NUP35Q8NFH5 326 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 SRD5A3Q9H8P0 318 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 C7orf71A4D174 169 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 STHQ8IWL8 128 aa12.4□□□□□ -0.42
HLA-F-216ENST00000259951 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 GZMBP10144 247 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 GTSF1Q8WW33 167 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
HLA-F-216ENST00000259951 SPINK13Q1W4C9 94 aa12.38□□□□□ -0.43
HLA-F-216ENST00000259951 PGLYRP4Q96LB8 373 aa12.38□□□□□ -0.43
HLA-F-216ENST00000259951 C1orf196B1AJZ1 125 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 AMBPP02760 352 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 ZNF124Q15973 351 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 WDR73Q6P4I2 378 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 GTSCR1Q86UQ5 136 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 IGKV3D-20A0A0C4DH25 116 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 M0R2Z0 102 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 SPINK4O60575 86 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 CD7P09564 240 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 NUTF2P61970 127 aaKnown RBP12.37□□□□□ -0.43
HLA-F-216ENST00000259951 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 C11orf21Q9P2W6 132 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 NAGKQ9UJ70 344 aa12.37□□□□□ -0.43
HLA-F-216ENST00000259951 TRAV12-3A0A0B4J271 114 aa12.36□□□□□ -0.43
HLA-F-216ENST00000259951 WIPF1O43516 503 aa12.36□□□□□ -0.43
HLA-F-216ENST00000259951 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms