RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CTXN1P60606 82 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 RHOHQ15669 191 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 PVRIGQ6DKI7 326 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 LYPD5Q6UWN5 251 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 ZNF576Q9H609 170 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 PRR14LQ5THK1 2151 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 INTS1Q8N201 2190 aaKnown RBP5.92□□□□□ -1.46
GPNMB-201ENST00000258733 DIDO1Q9BTC0 2240 aaKnown RBP5.92□□□□□ -1.46
GPNMB-201ENST00000258733 PMS2P5A8MQ11 134 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 SMKR1H3BMG3 65 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 INAFM2P0DMQ5 153 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 BRCA2P51587 3418 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 A0A0B4J2C4 111 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 IGHV4-39P01824 125 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 PRSS1P07477 247 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 CFC1BP0CG36 223 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 CFC1P0CG37 223 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 ECSCRQ19T08 205 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 PAXXQ9BUH6 204 aa5.92□□□□□ -1.46
GPNMB-201ENST00000258733 H7BZZ5 65 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.91□□□□□ -1.46
GPNMB-201ENST00000258733 Q8N8P6 123 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 NACAE9PAV3 2078 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 LOC389332A0A1B0GUA5 103 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 GP1BBP13224 206 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 TCF15Q12870 199 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 LINC00114Q6XXX2 140 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 Q8N2B8 174 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 MPLKIPQ8TAP9 179 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 FOXQ1Q9C009 403 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 DYNLRB1Q9NP97 96 aa5.91□□□□□ -1.46
GPNMB-201ENST00000258733 TIMM13Q9Y5L4 95 aaPredicted RBP5.91□□□□□ -1.46
GPNMB-201ENST00000258733 TRAV40A0A0B4J280 105 aa5.9□□□□□ -1.46
GPNMB-201ENST00000258733 H7C423 109 aa5.9□□□□□ -1.46
GPNMB-201ENST00000258733 SFTPA2Q8IWL1 248 aa5.9□□□□□ -1.46
GPNMB-201ENST00000258733 SFTPA1Q8IWL2 248 aa5.9□□□□□ -1.46
GPNMB-201ENST00000258733 COL5A1P20908 1838 aaPredicted RBP5.9□□□□□ -1.47
GPNMB-201ENST00000258733 FAM223BA6NKX1 122 aa5.9□□□□□ -1.47
GPNMB-201ENST00000258733 VCYO14598 125 aa5.9□□□□□ -1.47
GPNMB-201ENST00000258733 SEM1Q6ZVN7 128 aa5.9□□□□□ -1.47
GPNMB-201ENST00000258733 ZNF524Q96C55 264 aa5.9□□□□□ -1.47
GPNMB-201ENST00000258733 TMEM167BQ9NRX6 74 aa5.9□□□□□ -1.47
GPNMB-201ENST00000258733 XCL1P47992 114 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 SUB1P53999 127 aaKnown RBP eCLIP5.89□□□□□ -1.47
GPNMB-201ENST00000258733 ZNF497Q6ZNH5 498 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 RPP21Q9H633 154 aaKnown RBP5.89□□□□□ -1.47
GPNMB-201ENST00000258733 XCL2Q9UBD3 114 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 IGLV3-16A0A075B6K0 115 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 OVOL3O00110 214 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 LINC01559Q495D7 138 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 C20orf197Q8N268 126 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 FXYD5Q96DB9 178 aa5.89□□□□□ -1.47
GPNMB-201ENST00000258733 M0R378 163 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 THAP8Q8NA92 274 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 GFRA4Q9GZZ7 299 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 FGF12P61328 243 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 C16orf47Q6ZP98 133 aaPredicted RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 Q96M66 194 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 FANCD2OSQ96PS1 177 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 CCL28Q9NRJ3 127 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 A0A096LPE4 126 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 A0A1W2PPZ6 126 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1BA6NDE4 496 aaKnown RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1EA6NEQ0 496 aaKnown RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 IGHV3-33P01772 117 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1DP0C7P1 496 aaKnown RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1A1P0DJD3 496 aaKnown RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1CP0DJD4 496 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 RBMY1FQ15415 496 aaKnown RBP5.88□□□□□ -1.47
GPNMB-201ENST00000258733 PAPPA-AS1Q5QFB9 102 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 SLC25A29Q8N8R3 303 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 TMEM75Q8N9X5 138 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 TIMM17AQ99595 171 aa5.88□□□□□ -1.47
GPNMB-201ENST00000258733 COL4A3Q01955 1670 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1-5P01602 117 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 CLLU1OSQ5K130 101 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 C7orf69Q9H7B7 122 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1D-13A0A0B4J2D9 117 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 NDUFB3O43676 98 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1-39P01597 117 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1D-39P04432 117 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1-13P0DP09 117 aa5.87□□□□□ -1.47
GPNMB-201ENST00000258733 MRPL35Q9NZE8 188 aaKnown RBP5.87□□□□□ -1.47
GPNMB-201ENST00000258733 H0Y8X5 98 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 CD52P31358 61 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 COL4A2P08572 1712 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 TMEM30CPA0ZSE6 113 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 F6UB75 175 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 J3QT63 122 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 PRSS2P07478 247 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 SOSTDC1Q6X4U4 206 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 MKXQ8IYA7 352 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 BPESC1Q9GZL8 116 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 ADAMTS20P59510 1910 aa5.86□□□□□ -1.47
GPNMB-201ENST00000258733 LRP4O75096 1905 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 IGKV1-9A0A0C4DH69 117 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 ZNF815PA8K554 130 aa5.85□□□□□ -1.47
GPNMB-201ENST00000258733 WNT9BO14905 357 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms