RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 UPK3BQ9BT76 320 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 TDRD6O60522 2096 aaKnown RBP5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 VCYO14598 125 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 Q6JHZ5 121 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 Q6P435 159 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 C2orf66Q6UXQ4 117 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 FAM216BQ8N7L0 139 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 FAM168AQ92567 244 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 LYZL4Q96KX0 146 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 TRPM6Q9BX84 2022 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 LINC00114Q6XXX2 140 aa5.32□□□□□ -1.56
PDGFRA-201ENST00000257290 DAND5Q8N907 189 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 XCL1P47992 114 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 CXCL6P80162 114 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 XCL2Q9UBD3 114 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 MYO7AQ13402 2215 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 PROP1O75360 226 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 NKAPP1Q8N9T2 125 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 CXXC4Q9H2H0 198 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 LINC01561Q8N1V8 128 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 A0A0G2JRQ6 117 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 C12orf77C9JDV5 145 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 CKAP5Q14008 2032 aa5.31□□□□□ -1.56
PDGFRA-201ENST00000257290 CFHR1Q03591 330 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 CLEC2BQ92478 149 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 LTBP2Q14767 1821 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 TRAV13-2A0A0B4J235 113 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 TRBV27A0A0K0K1C4 114 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 CD28P10747 220 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 ERCC8Q13216 396 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 TRAV7A0A075B6U4 112 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 TRBV30A0A0K0K1B3 111 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 ZNF876PQ49A33 203 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 IGHV1OR15-1A0A075B7D0 117 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 SH2D1AO60880 128 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 RPL27AP46776 148 aaKnown RBP5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 CLEC19AQ6UXS0 136 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 Q6ZRM9 215 aa5.3□□□□□ -1.56
PDGFRA-201ENST00000257290 DOCK4Q8N1I0 1966 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 TMEM178BH3BS89 294 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 EGR2P11161 476 aaPredicted RBP5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 MYCNOSP40205 109 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 Q6ZS49 121 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 THAP8Q8NA92 274 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 FAM19A4Q96LR4 140 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 ORMDL1Q9P0S3 153 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 IGHV3-64DA0A0J9YX35 117 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 JMJD7-PLA2G4BH0Y9G9 81 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 IMMP1LQ96LU5 166 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 PLXNA4Q9HCM2 1894 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 IGLV3-32A0A0A0MS00 114 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 C15orf65H3BRN8 121 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 K7EM74 188 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 FAM222AQ5U5X8 452 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 TPSG1Q9NRR2 321 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 Q6ZR03 302 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 NDUFA12Q9UI09 145 aa5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 NUP210Q8TEM1 1887 aaPredicted RBP5.29□□□□□ -1.56
PDGFRA-201ENST00000257290 ADARB2-AS1A8MUL3 147 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 PATE4P0C8F1 98 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 HIST2H2BCQ6DN03 193 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 HIST2H2BDQ6DRA6 164 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 C1orf159Q96HA4 380 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 SCN2AQ99250 2005 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 Q96MF0 132 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 IGKV1-9A0A0C4DH69 117 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 C15orf61A6NNL5 157 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 NDPQ00604 133 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 ODF3Q96PU9 254 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 PLXND1Q9Y4D7 1925 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 H0YGX0 51 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 UBE2D3P61077 147 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 UBE2D2P62837 147 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 CCDC140Q96MF4 163 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 CNTRLQ7Z7A1 2325 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 SPRY3O43610 288 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 EFNA4P52798 201 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 NANOS2P60321 138 aaKnown RBP5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 PRO0461Q9UI25 63 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 SPTBP11277 2137 aa5.28□□□□□ -1.56
PDGFRA-201ENST00000257290 IGHV3-13P01766 116 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 CD59P13987 128 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 MIFP14174 115 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 ESRGQ1W209 222 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 A0A1B0GXF2 115 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 CLPSP04118 112 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 CD177Q8N6Q3 437 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 C2orf48Q96LS8 159 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 ZNF71Q9NQZ8 489 aaPredicted RBP5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 FDCSPQ8NFU4 85 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 PLXNA2O75051 1894 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 IGHV3-33P01772 117 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 FAM74A4Q5TZK3 123 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 TRBV7-3A0A075B6L6 115 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
PDGFRA-201ENST00000257290 HOXB4P17483 251 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms