RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 FOXC1Q12948 553 aa10.72□□□□□ -0.69
GFAP-201ENST00000253408 IGF2RP11717 2491 aa10.72□□□□□ -0.69
GFAP-201ENST00000253408 G3V318 75 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 DPM2O94777 84 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 IGHG4P01861 327 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 TMEM78Q5T7P6 136 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 DPF1Q92782 380 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 NXT2Q9NPJ8 142 aaKnown RBP10.71□□□□□ -0.69
GFAP-201ENST00000253408 MUC6Q6W4X9 2439 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 NPBQ8NG41 125 aa10.71□□□□□ -0.69
GFAP-201ENST00000253408 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.7
GFAP-201ENST00000253408 H3BVH4 76 aa10.71□□□□□ -0.7
GFAP-201ENST00000253408 M0R381 172 aa10.71□□□□□ -0.7
GFAP-201ENST00000253408 TTC9CQ8N5M4 171 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 OR11H6Q8NGC7 330 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 IGHV7-81A0A0B4J1V7 117 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 RPL11P62913 178 aaKnown RBP10.7□□□□□ -0.7
GFAP-201ENST00000253408 PAX8Q06710 450 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 HIST1H4GQ99525 98 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 NPFFR1Q9GZQ6 430 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 C11orf21Q9P2W6 132 aa10.7□□□□□ -0.7
GFAP-201ENST00000253408 MAP1AP78559 2803 aaPredicted RBP10.7□□□□□ -0.7
GFAP-201ENST00000253408 IGHV3OR16-10A0A075B7F0 116 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 IGKV3D-20A0A0C4DH25 116 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 PRTN3P24158 256 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 CCDC144NLQ6NUI1 221 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 IGF2-ASQ6U949 168 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 AGRNO00468 2067 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 G3V4G9 280 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 SIVA1O15304 175 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 DEFB1P60022 68 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 SCGB2A2Q13296 93 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 LINC01548A6NM66 108 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 SPOCK3Q9BQ16 436 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 HHLA3Q9XRX5 114 aa10.69□□□□□ -0.7
GFAP-201ENST00000253408 CDSNQ15517 529 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 MAPKAPK5-AS1Q8N8E1 139 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 MGPP08493 103 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
GFAP-201ENST00000253408 LY6G5BQ8NDX9 201 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 GTSF1LQ9H1H1 148 aa10.68□□□□□ -0.7
GFAP-201ENST00000253408 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 VKORC1Q9BQB6 163 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 LAGE3Q14657 143 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 TMEM219Q86XT9 240 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
GFAP-201ENST00000253408 ZNF575Q86XF7 245 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 Q8N8P6 123 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
GFAP-201ENST00000253408 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 BUB3O43684 328 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 ATP5LO75964 103 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 H3BMG7 143 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 IGF1P05019 195 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 CEND1Q8N111 149 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 METTL26Q96S19 204 aa10.66□□□□□ -0.7
GFAP-201ENST00000253408 ZNF479Q96JC4 524 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 ODF3BA8MYP8 253 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 WFDC2Q14508 124 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 Q8N9W7 124 aa10.65□□□□□ -0.7
GFAP-201ENST00000253408 M0R1W7 72 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 C8orf86Q6ZUL3 223 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 SH2D6Q7Z4S9 175 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 CYSLTR1Q9Y271 337 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 HRNRQ86YZ3 2850 aaPredicted RBP10.64□□□□□ -0.71
GFAP-201ENST00000253408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.64□□□□□ -0.71
GFAP-201ENST00000253408 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 ZNF502Q8TBZ5 544 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 MSRB2Q9Y3D2 182 aa10.64□□□□□ -0.71
GFAP-201ENST00000253408 EMP1P54849 157 aa10.63□□□□□ -0.71
GFAP-201ENST00000253408 C14orf178Q8N769 122 aaPredicted RBP10.63□□□□□ -0.71
GFAP-201ENST00000253408 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
GFAP-201ENST00000253408 ETDBQ3ZM63 59 aa10.63□□□□□ -0.71
GFAP-201ENST00000253408 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
GFAP-201ENST00000253408 SRSF1Q07955 248 aaKnown RBP eCLIP10.62□□□□□ -0.71
GFAP-201ENST00000253408 TMEM190Q8WZ59 177 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
GFAP-201ENST00000253408 SLC50A1Q9BRV3 221 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 ZFAND3Q9H8U3 227 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 OR11H12B2RN74 326 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 SAA4P35542 130 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 OR11H1Q8NG94 326 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 OR11H2Q8NH07 326 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
GFAP-201ENST00000253408 TSSC4Q9Y5U2 329 aaPredicted RBP10.62□□□□□ -0.71
GFAP-201ENST00000253408 IGLL5B9A064 214 aa10.61□□□□□ -0.71
GFAP-201ENST00000253408 PRR9Q5T870 116 aa10.61□□□□□ -0.71
GFAP-201ENST00000253408 EEF1AKMT3Q96AZ1 226 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms