RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 SCRT2Q9NQ03 307 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 TRBV19A0A075B6N1 114 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 RBX1P62877 108 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 SLC50A1Q9BRV3 221 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 CFAP54Q96N23 3096 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 XIRP2A4UGR9 3374 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 ERCC8Q13216 396 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 LGALS9BQ3B8N2 356 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 C3orf36Q3SXR2 165 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 MRPL51Q4U2R6 128 aaKnown RBP7.35□□□□□ -1.23
COL21A1-201ENST00000244728 FAM120AOSQ5T036 256 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 LGALS9CQ6DKI2 356 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
COL21A1-201ENST00000244728 CENPEQ02224 2701 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 TEX36Q5VZQ5 186 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 LYPD1Q8N2G4 141 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 MRPL36Q9P0J6 103 aaKnown RBP7.34□□□□□ -1.23
COL21A1-201ENST00000244728 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 E7EUB6 86 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 HTN3P15516 51 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 RPL13AP40429 203 aaKnown RBP7.34□□□□□ -1.23
COL21A1-201ENST00000244728 TMEM75Q8N9X5 138 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 NRGNQ92686 78 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 RNF5Q99942 180 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 CYSLTR1Q9Y271 337 aa7.34□□□□□ -1.23
COL21A1-201ENST00000244728 IGKV3D-20A0A0C4DH25 116 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 NPYP01303 97 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 LINC01545Q5VT33 79 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 C1orf229Q6ZS94 237 aaPredicted RBP7.33□□□□□ -1.24
COL21A1-201ENST00000244728 PIP4P2Q8N4L2 257 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 CSTL1Q9H114 145 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 DKK2Q9UBU2 259 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 SMPXQ9UHP9 88 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TRIOO75962 3097 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 K7ERJ3 54 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
COL21A1-201ENST00000244728 SRSF1Q07955 248 aaKnown RBP eCLIP7.33□□□□□ -1.24
COL21A1-201ENST00000244728 NSUN5P1Q3KNT7 163 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 JMJD8Q96S16 334 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 IGLC1P0CG04 106 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TNFRSF18Q9Y5U5 241 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 OOSP1A8MZH6 123 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TMEM238C9JI98 176 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TNFRSF6BO95407 300 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 LGALS3P17931 250 aaKnown RBP7.33□□□□□ -1.24
COL21A1-201ENST00000244728 SYNJ2BPP57105 145 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 LAGE3Q14657 143 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 RITA1Q96K30 269 aa7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TSSC4Q9Y5U2 329 aaPredicted RBP7.33□□□□□ -1.24
COL21A1-201ENST00000244728 TRAV12-3A0A0B4J271 114 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 ZNF815PA8K554 130 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 MSMBP08118 114 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 LINC00322Q6ZN03 302 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-201ENST00000244728 Q71RC1 249 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-201ENST00000244728 RHPN1-AS1Q9BWJ2 59 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 EYSQ5T1H1 3165 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 TMEM8BA6NDV4 472 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 GEMIN7Q9H840 131 aaKnown RBP7.32□□□□□ -1.24
COL21A1-201ENST00000244728 CHTOPQ9Y3Y2 248 aaKnown RBP7.32□□□□□ -1.24
COL21A1-201ENST00000244728 NCKAP5O14513 1909 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 TRAV21A0A0B4J279 112 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 GP9P14770 177 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 UBE2E1P51965 193 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 Q8N976 141 aa7.32□□□□□ -1.24
COL21A1-201ENST00000244728 TNRC6AQ8NDV7 1962 aaKnown RBP7.32□□□□□ -1.24
COL21A1-201ENST00000244728 TRGV2A0A075B6R0 118 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 TMEM262E9PQX1 116 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 UBE2L6O14933 153 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 LHBP01229 141 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 C19orf54Q5BKX5 351 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 MBD6Q96DN6 1003 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 CEP192Q8TEP8 1941 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 EXPH5Q8NEV8 1989 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 A0A1B0GXF2 115 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
COL21A1-201ENST00000244728 CD300EQ496F6 205 aaPredicted RBP7.31□□□□□ -1.24
COL21A1-201ENST00000244728 IL17RELQ6ZVW7 336 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 TMEM14CQ9P0S9 112 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 C14orf178Q8N769 122 aaPredicted RBP7.31□□□□□ -1.24
COL21A1-201ENST00000244728 Q8NA96 180 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 KLF12Q9Y4X4 402 aa7.31□□□□□ -1.24
COL21A1-201ENST00000244728 CHD9Q3L8U1 2897 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 CKS1BP61024 79 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 AMTNQ6UX39 209 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 VCANP13611 3396 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 PDE6HQ13956 83 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 UBE2E2Q96LR5 201 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 PRR25Q96S07 402 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 TTTY13Q9BZ97 58 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 TEX48A0A1B0GUV7 120 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 LINC01559Q495D7 138 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 C1orf159Q96HA4 380 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
COL21A1-201ENST00000244728 COL5A1P20908 1838 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms