RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MUC21A0A140T8X8 626 aa13.99□□□□□ -0.17
HOXC11-201ENST00000243082 LGALS1P09382 135 aaKnown RBP13.99□□□□□ -0.17
HOXC11-201ENST00000243082 HIST1H1AQ02539 215 aaPredicted RBP13.99□□□□□ -0.17
HOXC11-201ENST00000243082 MUC21Q5SSG8 566 aa13.99□□□□□ -0.17
HOXC11-201ENST00000243082 IGKV3D-20A0A0C4DH25 116 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 OVOL1O14753 267 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 DEFB1P60022 68 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 SSTP61278 116 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 UBE2E2Q96LR5 201 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 LINC00477Q96M19 166 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 LENEPQ9Y5L5 61 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 PKIAP61925 76 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 ZNF664Q8N3J9 261 aa13.98□□□□□ -0.17
HOXC11-201ENST00000243082 CCDC168Q8NDH2 2452 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 TLN2Q9Y4G6 2542 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 FAM181BA6NEQ2 426 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 SRD5A1P18405 259 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 NTF3P20783 257 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 RNASEKQ6P5S7 137 aaKnown RBP13.97□□□□□ -0.17
HOXC11-201ENST00000243082 PRO1933Q9H354 126 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 IGHV4OR15-8A0A075B7B6 117 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 A0A087WW49 117 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 M0QZ24 198 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 HSBP1O75506 76 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 PRR9Q5T870 116 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 Q6ZQT7 251 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 OR10J6PQ8NGY7 276 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 CNFNQ9BYD5 112 aa13.97□□□□□ -0.17
HOXC11-201ENST00000243082 FAM104BQ5XKR9 115 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 REC114Q7Z4M0 266 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 TEX29Q8N6K0 151 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 DCANP1Q8TF63 244 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 FLNAP21333 2647 aaKnown RBP13.95□□□□□ -0.18
HOXC11-201ENST00000243082 F6UB75 175 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 TMEM86BQ8N661 226 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 ZFAND2AQ8N6M9 145 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 OR8A1Q8NGG7 326 aa13.95□□□□□ -0.18
HOXC11-201ENST00000243082 LGALS9O00182 355 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 SYNJ2BPP57105 145 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 KRTDAPP60985 99 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 KRTAP1-1Q07627 177 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 TWIST1Q15672 202 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 AMN1Q8IY45 258 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 Q8N976 141 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 FAM19A4Q96LR4 140 aa13.94□□□□□ -0.18
HOXC11-201ENST00000243082 TSTD3H0UI37 97 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 CHCHD1Q96BP2 118 aaKnown RBP13.93□□□□□ -0.18
HOXC11-201ENST00000243082 MSRB1Q9NZV6 116 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 ITPR2Q14571 2701 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 M0R2Z0 102 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 LINC00614P0C842 121 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 HOXD3P31249 432 aaPredicted RBP13.93□□□□□ -0.18
HOXC11-201ENST00000243082 KLHDC1Q8N7A1 406 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 FOXC2Q99958 501 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 U3KQK5 164 aa13.93□□□□□ -0.18
HOXC11-201ENST00000243082 C3orf79P0CE67 100 aa13.92□□□□□ -0.18
HOXC11-201ENST00000243082 C18orf65Q6ZTR6 163 aa13.92□□□□□ -0.18
HOXC11-201ENST00000243082 AKAP9Q99996 3911 aa13.92□□□□□ -0.18
HOXC11-201ENST00000243082 TEX43Q6ZNM6 134 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 WFDC3Q8IUB2 231 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 MS4A6AQ9H2W1 248 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 SONP18583 2426 aaKnown RBP13.91□□□□□ -0.18
HOXC11-201ENST00000243082 D6R8Y8 96 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 ID1P41134 155 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 MRPL51Q4U2R6 128 aaKnown RBP13.91□□□□□ -0.18
HOXC11-201ENST00000243082 SAMD13Q5VXD3 122 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 TMEM191AQ9H0A3 160 aa13.91□□□□□ -0.18
HOXC11-201ENST00000243082 J3KRW8 73 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 PMCHL1Q16048 86 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 TDRG1Q3Y452 100 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 DMRTA1Q5VZB9 504 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 IGHV1-24A0A0C4DH33 117 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 DNAJC9-AS1A6NH13 148 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 CSN3P07498 182 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 DDTP30046 118 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 TCTEX1D4Q5JR98 221 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 APRG1Q8IVJ8 170 aa13.9□□□□□ -0.18
HOXC11-201ENST00000243082 UNC79Q9P2D8 2635 aa13.89□□□□□ -0.19
HOXC11-201ENST00000243082 TRBV7-9A0A0J9YWB2 115 aa13.89□□□□□ -0.19
HOXC11-201ENST00000243082 EBLN2Q6P2I7 272 aa13.89□□□□□ -0.19
HOXC11-201ENST00000243082 Q6ZSV7 163 aa13.89□□□□□ -0.19
HOXC11-201ENST00000243082 C2orf70A6NJV1 201 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 CD5LO43866 347 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 ORMDL3Q8N138 153 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 RNF185Q96GF1 192 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 MYO9AB2RTY4 2548 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 TRAV21A0A0B4J279 112 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 KIR3DS1Q14943 382 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 DEFB136Q30KP8 78 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 PRELID3AQ96N28 172 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 ESM1Q9NQ30 184 aa13.88□□□□□ -0.19
HOXC11-201ENST00000243082 SNAI2O43623 268 aa13.87□□□□□ -0.19
HOXC11-201ENST00000243082 OR5AL1P0C617 328 aa13.87□□□□□ -0.19
HOXC11-201ENST00000243082 TFPI2P48307 235 aa13.87□□□□□ -0.19
HOXC11-201ENST00000243082 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
HOXC11-201ENST00000243082 OR10AG1Q8NH19 301 aa13.87□□□□□ -0.19
HOXC11-201ENST00000243082 K7EQG2 157 aa13.86□□□□□ -0.19
HOXC11-201ENST00000243082 RAB4AP20338 218 aa13.86□□□□□ -0.19
HOXC11-201ENST00000243082 SLURP1P55000 103 aa13.86□□□□□ -0.19
HOXC11-201ENST00000243082 KIR2DL5BA0A0G2JN68 375 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms