RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 PSMG4Q5JS54 123 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 WIPF2Q8TF74 440 aaPredicted RBP7.35□□□□□ -1.23
TTC1-201ENST00000231238 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
TTC1-201ENST00000231238 ZNF492Q9P255 531 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 F8P00451 2351 aa7.35□□□□□ -1.23
TTC1-201ENST00000231238 XKRY2A2RUG3 117 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 RAB5BP61020 215 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 EBLN2Q6P2I7 272 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 Q6ZSN1 163 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 NDUFA11Q86Y39 141 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 OR2D3Q8NGH3 330 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 ZC2HC1AQ96GY0 325 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 PRR25Q96S07 402 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 MLST8Q9BVC4 326 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 V9GYV3 84 aa7.34□□□□□ -1.23
TTC1-201ENST00000231238 FN1P02751 2386 aaKnown RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 ANK3Q12955 4377 aaKnown RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 A8MWL6 223 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 SOCS3O14543 225 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 PFN1P07737 140 aaKnown RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 CXCL1P09341 107 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.33□□□□□ -1.24
TTC1-201ENST00000231238 OR4B1Q8NGF8 309 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 LINC00477Q96M19 166 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 AGPAT4-IT1Q9H0P7 198 aa7.33□□□□□ -1.24
TTC1-201ENST00000231238 TRBV24-1A0A075B6N3 115 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 TRAV9-1A0A075B6T8 112 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 OR4C46A6NHA9 309 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 J3KRW8 73 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 SAP30O75446 220 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 CA1P00915 261 aaPredicted RBP7.32□□□□□ -1.24
TTC1-201ENST00000231238 CSN3P07498 182 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 FHL3Q13643 280 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 OR8A1Q8NGG7 326 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 BORCS7Q96B45 105 aa7.32□□□□□ -1.24
TTC1-201ENST00000231238 SETXQ7Z333 2677 aaKnown RBP7.32□□□□□ -1.24
TTC1-201ENST00000231238 NF1P21359 2839 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 TMEM189A5PLL7 270 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 FABP5P3A8MUU1 101 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 K7EQG2 157 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 SPINK4O60575 86 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 SH2D1AO60880 128 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 ORM1P02763 201 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 RAB4BP61018 213 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 C9orf47Q6ZRZ4 202 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 DCANP1Q8TF63 244 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 TSKUQ8WUA8 353 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 TPPP3Q9BW30 176 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 NAT8BQ9UHF3 227 aa7.31□□□□□ -1.24
TTC1-201ENST00000231238 TMSB15BA0A087X1C1 80 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 C19orf71A6NCJ1 209 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 F6UB75 175 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 S100A6P06703 90 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 GPX1P07203 203 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 RPS20P60866 119 aaKnown RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 DEFB114Q30KQ6 69 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 CT83Q5H943 113 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 TMEM61Q8N0U2 210 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 ZFP82Q8N141 532 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 FRZBQ92765 325 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 YPEL4Q96NS1 127 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 GPR61Q9BZJ8 451 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 LENEPQ9Y5L5 61 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 TRAV2A0A0B4J234 112 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 TRAV25A0A0B4J276 109 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 IZUMO1RA6ND01 250 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 DUSP14O95147 198 aaKnown RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 DEFB1P60022 68 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 CD300EQ496F6 205 aaPredicted RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 MRPL54Q6P161 138 aaKnown RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 ADAMTSL5Q6ZMM2 481 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 LINC00322Q6ZN03 302 aaPredicted RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 NEU1Q99519 415 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 SPAG8Q99932 426 aaPredicted RBP7.3□□□□□ -1.24
TTC1-201ENST00000231238 SRD5A3Q9H8P0 318 aa7.3□□□□□ -1.24
TTC1-201ENST00000231238 C2CD3Q4AC94 2353 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 HIGD1CA8MV81 97 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 TSPOP30536 169 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 LEPP41159 167 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 DEFB131AP59861 70 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 COX19Q49B96 90 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 WDR73Q6P4I2 378 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 NAGKQ9UJ70 344 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 TRAPPC1Q9Y5R8 145 aa7.29□□□□□ -1.24
TTC1-201ENST00000231238 JMJD1CQ15652 2540 aa7.28□□□□□ -1.24
TTC1-201ENST00000231238 TRGC2P03986 189 aa7.28□□□□□ -1.24
TTC1-201ENST00000231238 GZMBP10144 247 aa7.28□□□□□ -1.24
TTC1-201ENST00000231238 RNASE4P34096 147 aaKnown RBP7.28□□□□□ -1.24
TTC1-201ENST00000231238 KRTAP10-3P60369 221 aa7.28□□□□□ -1.24
TTC1-201ENST00000231238 Q6AWC8 147 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms