RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 C8orf49Q96NF6 230 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
SEC61B-201ENST00000223641 M0R2Z0 102 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 RPL35AP18077 110 aaKnown RBP10.27□□□□□ -0.77
SEC61B-201ENST00000223641 CRIP1P50238 77 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 SMUG1Q53HV7 270 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 ZC2HC1AQ96GY0 325 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 CSTL1Q9H114 145 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 NAT8Q9UHE5 227 aa10.27□□□□□ -0.77
SEC61B-201ENST00000223641 F8W036 122 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 K7EN84 100 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
SEC61B-201ENST00000223641 GCGP01275 180 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 PRB2P02812 416 aaPredicted RBP10.26□□□□□ -0.77
SEC61B-201ENST00000223641 GPX1P07203 203 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
SEC61B-201ENST00000223641 GFI1BQ5VTD9 330 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 Q6AWC8 147 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 NHLRC2Q8NBF2 726 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 CSNK1G2-AS1Q8NCQ2 148 aa10.26□□□□□ -0.77
SEC61B-201ENST00000223641 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
SEC61B-201ENST00000223641 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 KRBOX1C9JBD0 128 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 FXYD7P58549 80 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 RPL23P62829 140 aaKnown RBP10.25□□□□□ -0.77
SEC61B-201ENST00000223641 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 NIPSNAP3BQ9BS92 247 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 C1QTNF4Q9BXJ3 329 aa10.25□□□□□ -0.77
SEC61B-201ENST00000223641 C7orf71A4D174 169 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 C19orf71A6NCJ1 209 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
SEC61B-201ENST00000223641 FRMD6-AS1P0C7T7 363 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
SEC61B-201ENST00000223641 RBMY1CP0DJD4 496 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 APOC4P55056 127 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 BTN1A1Q13410 526 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 RBMY1FQ15415 496 aaKnown RBP10.24□□□□□ -0.77
SEC61B-201ENST00000223641 BIN3Q9NQY0 253 aa10.24□□□□□ -0.77
SEC61B-201ENST00000223641 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 FABP5P3A8MUU1 101 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 J3KRW8 73 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 UBE2CO00762 179 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 CA1P00915 261 aaPredicted RBP10.23□□□□□ -0.77
SEC61B-201ENST00000223641 RNASE4P34096 147 aaKnown RBP10.23□□□□□ -0.77
SEC61B-201ENST00000223641 PNRC1Q12796 327 aaPredicted RBP10.23□□□□□ -0.77
SEC61B-201ENST00000223641 Q6ZQT7 251 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
SEC61B-201ENST00000223641 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 MGST1P10620 155 aaKnown RBP10.22□□□□□ -0.77
SEC61B-201ENST00000223641 OR5I1Q13606 314 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 FAM162BQ5T6X4 162 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 FAM231DQ6ZW35 169 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 C1orf158Q8N1D5 194 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 ISOC2Q96AB3 205 aa10.22□□□□□ -0.77
SEC61B-201ENST00000223641 SH2D1AO60880 128 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 INSP01308 110 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 ZNF705AQ6ZN79 300 aaPredicted RBP10.21□□□□□ -0.77
SEC61B-201ENST00000223641 Q6ZWC4 215 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 LINC00467Q9BRT7 94 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.77
SEC61B-201ENST00000223641 ADIRFQ15847 76 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 PRR27Q6MZM9 219 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 TMEM256Q8N2U0 113 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 NUDT10Q8NFP7 164 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 NUDT11Q96G61 164 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
SEC61B-201ENST00000223641 IGKV3D-20A0A0C4DH25 116 aa10.19□□□□□ -0.78
SEC61B-201ENST00000223641 H7BYZ3 331 aa10.19□□□□□ -0.78
SEC61B-201ENST00000223641 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
SEC61B-201ENST00000223641 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
SEC61B-201ENST00000223641 SFRP2Q96HF1 295 aa10.19□□□□□ -0.78
SEC61B-201ENST00000223641 PYGO2Q9BRQ0 406 aa10.19□□□□□ -0.78
SEC61B-201ENST00000223641 RNASE7Q9H1E1 156 aaKnown RBP10.19□□□□□ -0.78
SEC61B-201ENST00000223641 B4DEV8 164 aa10.18□□□□□ -0.78
SEC61B-201ENST00000223641 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
SEC61B-201ENST00000223641 RNF183Q96D59 192 aa10.18□□□□□ -0.78
SEC61B-201ENST00000223641 DAZAP1Q96EP5 407 aaKnown RBP10.18□□□□□ -0.78
SEC61B-201ENST00000223641 TP53TG1Q9Y2A0 90 aa10.18□□□□□ -0.78
SEC61B-201ENST00000223641 GOLT1BQ9Y3E0 138 aa10.18□□□□□ -0.78
SEC61B-201ENST00000223641 MEGF8Q7Z7M0 2845 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 IGHV1OR15-1A0A075B7D0 117 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 P01737 135 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 APOC3P02656 99 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 ERVFC1-1P60608 527 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 SBSPONQ8IVN8 264 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 SVBPQ8N300 66 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 MRAPQ8TCY5 172 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 KCNS1Q96KK3 526 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 NEU1Q99519 415 aa10.17□□□□□ -0.78
SEC61B-201ENST00000223641 CXCL1P09341 107 aa10.16□□□□□ -0.78
SEC61B-201ENST00000223641 DEFA6Q01524 100 aa10.16□□□□□ -0.78
SEC61B-201ENST00000223641 DEFB135Q30KP9 77 aa10.16□□□□□ -0.78
SEC61B-201ENST00000223641 CT83Q5H943 113 aa10.16□□□□□ -0.78
SEC61B-201ENST00000223641 MUC21Q5SSG8 566 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms