RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SRIP30626 198 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 OR10J3Q5JRS4 329 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 WFDC12Q8WWY7 111 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 MRPL53Q96EL3 112 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 DUX3Q96PT4 197 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 RPP21Q9H633 154 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 IQCJQ1A5X6 159 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 TCF24Q7RTU0 167 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 ZC2HC1AQ96GY0 325 aa14.89□□□□□ -0.03
TNFRSF1A-201ENST00000162749 IGKV3-7A0A075B6H7 116 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 NDUFA7O95182 113 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CD28P10747 220 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 GTSF1Q8WW33 167 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 RCHY1Q96PM5 261 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CLEC5AQ9NY25 188 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 HAX1O00165 279 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 BMI1P35226 326 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 OR1N2Q8NGR9 330 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 Q8TAT8 98 aa14.88□□□□□ -0.03
TNFRSF1A-201ENST00000162749 TEP1Q99973 2627 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 A0A1B0GXF2 115 aa14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 FBLL1A6NHQ2 334 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 C2orf70A6NJV1 201 aa14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 SCGB1D1O95968 90 aa14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 P01737 135 aa14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 C20orf173Q96LM9 149 aa14.87□□□□□ -0.03
TNFRSF1A-201ENST00000162749 RBAKDNA6NC62 111 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CT83Q5H943 113 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 DPF1Q92782 380 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 C8orf49Q96NF6 230 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 PRR25Q96S07 402 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 NAGKQ9UJ70 344 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 NPIPB6E9PJ23 425 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 TCAPO15273 167 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 TCF21O43680 179 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 RNF114Q9Y508 228 aa14.86□□□□□ -0.03
TNFRSF1A-201ENST00000162749 SRSF2Q01130 221 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 ERCC8Q13216 396 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CITED2Q99967 270 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 A8MWL6 223 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 GPX1P07203 203 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CAMPP49913 170 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 ATP5L2Q7Z4Y8 100 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 DCANP1Q8TF63 244 aa14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 SSBP4Q9BWG4 385 aaPredicted RBP14.85□□□□□ -0.03
TNFRSF1A-201ENST00000162749 TENM1Q9UKZ4 2725 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CRLF1O75462 422 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 CRIP1P50238 77 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 PROK1P58294 105 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 ADAMTSL5Q6ZMM2 481 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 NDUFAF3Q9BU61 184 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 SAMD10Q9BYL1 202 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 A0A1W2PRX2 142 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 SAPCD1Q5SSQ6 148 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 COX8CQ7Z4L0 72 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 C18orf32Q8TCD1 76 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 DAZAP1Q96EP5 407 aaKnown RBP14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 RAX2Q96IS3 184 aa14.84□□□□□ -0.03
TNFRSF1A-201ENST00000162749 PRR31Q5SQ13 230 aa14.83□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF738Q8NE65 137 aa14.83□□□□□ -0.04
TNFRSF1A-201ENST00000162749 OR9G4Q8NGQ1 327 aa14.83□□□□□ -0.04
TNFRSF1A-201ENST00000162749 TSSC4Q9Y5U2 329 aaPredicted RBP14.83□□□□□ -0.04
TNFRSF1A-201ENST00000162749 KCNS1Q96KK3 526 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 PGLYRP4Q96LB8 373 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 GFRA4Q9GZZ7 299 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 AGPAT4-IT1Q9H0P7 198 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 CT45A10P0DMU9 189 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 NUTF2P61970 127 aaKnown RBP14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 FHL3Q13643 280 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 C9orf47Q6ZRZ4 202 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 MS4A6AQ9H2W1 248 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ATRQ13535 2644 aa14.82□□□□□ -0.04
TNFRSF1A-201ENST00000162749 AGRNO00468 2067 aa14.81□□□□□ -0.04
TNFRSF1A-201ENST00000162749 PEMTQ9UBM1 199 aa14.81□□□□□ -0.04
TNFRSF1A-201ENST00000162749 HBBP68871 147 aa14.81□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ALKBH7Q9BT30 221 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF705DP0CH99 300 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF705BP0CI00 300 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 DEFB1P60022 68 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 SAMD13Q5VXD3 122 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 RBPMS2Q6ZRY4 209 aaKnown RBP14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 OR2D3Q8NGH3 330 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 FAM231BA6NCW3 169 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 M0QZ24 198 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 WFDC3Q8IUB2 231 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 OR4B1Q8NGF8 309 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 NDFIP1Q9BT67 221 aa14.8□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF324O75467 553 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-201ENST00000162749 AMTP48728 403 aa14.79□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF80P51504 273 aaPredicted RBP14.79□□□□□ -0.04
TNFRSF1A-201ENST00000162749 CCL24O00175 119 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 EREGO14944 169 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 PMCHP20382 165 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 TFPI2P48307 235 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ZNF138P52744 262 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 TDRG1Q3Y452 100 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 ID1P41134 155 aa14.78□□□□□ -0.04
TNFRSF1A-201ENST00000162749 FAM162BQ5T6X4 162 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms