RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ORMDL3Q8N138 153 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 FAM110DQ8TAY7 271 aaPredicted RBP10.15□□□□□ -0.79
CTNS-201ENST00000046640 AP1S3Q96PC3 154 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 MEGF9Q9H1U4 602 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 DKK2Q9UBU2 259 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 ZANQ9Y493 2812 aa10.15□□□□□ -0.79
CTNS-201ENST00000046640 H3BUT2 72 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 IGHG4P01861 327 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 K7ERU9 68 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 IGHV4-38-2P0DP08 117 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 CCL19Q99731 98 aa10.14□□□□□ -0.79
CTNS-201ENST00000046640 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 GATA1P15976 413 aaPredicted RBP10.13□□□□□ -0.79
CTNS-201ENST00000046640 LCNL1Q6ZST4 164 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 PRR25Q96S07 402 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 LRRK2Q5S007 2527 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 K7EMI3 77 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 PDE6HQ13956 83 aa10.13□□□□□ -0.79
CTNS-201ENST00000046640 ZNF48Q96MX3 618 aaPredicted RBP10.13□□□□□ -0.79
CTNS-201ENST00000046640 TMEM238C9JI98 176 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 C5orf56Q8N8D9 126 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 PEF1Q9UBV8 284 aaKnown RBP10.12□□□□□ -0.79
CTNS-201ENST00000046640 DOPEY2Q9Y3R5 2298 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 ATP5J2P56134 94 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 IGHV4-30-2A0A087WSY4 118 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 BUB3O43684 328 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 SCGB2A1O75556 95 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 GOSR1O95249 250 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 IGHV3-11P01762 117 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 ZNF462Q96JM2 2506 aa10.12□□□□□ -0.79
CTNS-201ENST00000046640 IGKV3-7A0A075B6H7 116 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 J3KRW8 73 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 HBDP02042 147 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 FGF6P10767 208 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 JMJD8Q96S16 334 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 CLPSL1A2RUU4 121 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 TRBV12-3P01733 135 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 Q6ZQT7 251 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 SPOCK3Q9BQ16 436 aa10.11□□□□□ -0.79
CTNS-201ENST00000046640 A1L4Q6 167 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 KIR3DS1Q14943 382 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 Q6ZS46 218 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 TRBV6-1A0A0K0K1D8 114 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 IGHV1-69P01742 117 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 TRGV3P03979 118 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 IL17RELQ6ZVW7 336 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 EEF1AKMT3Q96AZ1 226 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
CTNS-201ENST00000046640 TRAV41A0A0B4J266 112 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 PRB1P04280 392 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 PRSS1P07477 247 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 LEPP41159 167 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 DEFB1P60022 68 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 BLCAPP62952 87 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 ATP5G2Q06055 141 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 H3BUX3 64 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 PAX8Q06710 450 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 Q6AWC8 147 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 MAPK1IP1LQ8NDC0 245 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 ABCA12Q86UK0 2595 aa10.09□□□□□ -0.79
CTNS-201ENST00000046640 A0A1B0GW15 77 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 SMAD7O15105 426 aaKnown RBP10.08□□□□□ -0.8
CTNS-201ENST00000046640 SPRY2O43597 315 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 GCSHP23434 173 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 MOB4Q9Y3A3 225 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 CLEC2AQ6UVW9 174 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 METTL26Q96S19 204 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 KLK15Q9H2R5 256 aa10.08□□□□□ -0.8
CTNS-201ENST00000046640 IGKV2D-26A0A0A0MRZ7 120 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 LGALS9BQ3B8N2 356 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 C10orf105Q8TEF2 133 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 A0A0G2JLM5 398 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 RPL11P62913 178 aaKnown RBP10.07□□□□□ -0.8
CTNS-201ENST00000046640 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 BOD1L2Q8IYS8 172 aa10.07□□□□□ -0.8
CTNS-201ENST00000046640 A6NDN8 102 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 AVPP01185 164 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 SEC11AP67812 179 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
CTNS-201ENST00000046640 C9orf118A6NHY6 69 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 K7ERJ3 54 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 FOXC2Q99958 501 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 UFC1Q9Y3C8 167 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms