RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm12253Q5NC48 229 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Htr1dQ61224 374 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm10277Q6R5C6 214 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Q8C784 167 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr1183Q8VFF8 303 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr975Q8VG91 310 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr525Q8VGL5 309 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Susd3Q9D176 269 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Psmb2Q9R1P3 201 aa8.17□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 A0A286YD13 301 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm4787B2RUD9 748 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Igh-VJ558P01758 117 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Cox5aP12787 146 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp58P16372 489 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Defa6P50704 93 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ankub1Q3UUE9 192 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Rnf223Q3UV31 285 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Rnf144bQ8BKD6 301 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Senp8Q9D2Z4 221 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 9930021J03RikH3BKP8 2027 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 D3Ertd254eA0A0G2JEM5 796 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Trdv2-1A0A0G2JGB9 116 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20918J3QN17 227 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Insl3O09107 122 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Dhrs3O88876 302 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 P0C913 63 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Bpifa1P97361 278 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Vwc2lQ505H4 222 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Trdv2-2Q5R1A4 116 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Pef1Q8BFY6 275 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Fbxo46Q8BG80 603 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zc3h3Q8CHP0 950 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Hsd17b13Q8VCR2 304 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr1201Q8VGF5 307 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lamtor5Q9D1L9 91 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lsm4Q9QXA5 137 aaKnown RBP8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp352A2AML7 551 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Defa35E9QLQ1 93 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20815J3KMI0 227 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20914J3QME2 227 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 TectbO08524 329 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 P01647 108 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 P01804 111 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Bmpr1bP36898 502 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Cks2P56390 79 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Wnt10aP70701 417 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Trdv4Q5R1A3 115 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Slc35d2Q762D5 326 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Il22ra2Q80XF5 230 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Muc15Q8C6Z1 331 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr495Q8VF12 330 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ppp1r35Q9D8C8 260 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Tbl1xQ9QXE7 527 aa8.16□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Tcrg-C1A0A075B5Z0 172 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ccl22O88430 92 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Galr3O88853 370 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ca2P00920 260 aaKnown RBP8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Prss2P07146 246 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lgals1P16045 135 aaKnown RBP8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Slc25a5P51881 298 aaKnown RBP8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lyplal1Q3UFF7 239 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp273Q7M6W8 501 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp799Q8BHK4 648 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp52Q8BJ45 724 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr368Q8VF22 327 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Q9DAZ5 108 aa8.15□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 UtrnE9Q6R7 3430 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Trav7-4A0A075B6C1 113 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm13283A0A087WPG5 182 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Iglc1A0A0G2JE99 106 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Lrrc29A0A1B0GQY9 621 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tmem215A7E1Z1 235 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Smim13E9Q942 88 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr117L7N1Z1 317 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Pdcd6P12815 191 aaKnown RBP8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Klk1b9P15949 261 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Slc25a33Q3TZX3 320 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Trav7d-4Q5R1H9 113 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 C1qtnf6Q6IR41 264 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 OstcQ78XF5 149 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Gm5468Q8C3D3 155 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr130Q8VFC1 317 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr473Q8VG44 310 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr922Q8VG50 311 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Borcs7Q9CRC6 105 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Hyls1Q9CXX0 307 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Lypd2Q9DD23 127 aa8.15□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 A0A286YDM5 308 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Tgfbr3lD3YZZ2 297 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 CrygsO35486 178 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Ltb4rO88855 351 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 MscO88940 201 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Defa9P50707 93 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rpl31P62900 125 aaKnown RBP8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Grb2Q60631 217 aaKnown RBP8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr9Q60885 312 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 NppcQ61839 126 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr1014Q7TR95 305 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Rspo2Q8BFU0 243 aa8.14□□□□□ -1.11
Hmgb1-201ENSMUST00000085546 Olfr763Q8VGC1 309 aa8.14□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 39.2 ms