RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ndufb10Q9DCS9 176 aa10.77□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr926Q9EQ98 308 aa10.77□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Pmaip1Q9JM54 103 aa10.77□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ifitm7G3X9Z2 141 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr147Q60886 317 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr1437Q7TQR7 312 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 NracQ8BNX7 165 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Loxl4Q924C6 757 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Prss28Q924N9 274 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Dppa2Q9CWH0 301 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr1118A0A0J9YUE7 307 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 1700003H04RikE9PXM2 192 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm10881P01642 115 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Iglc3P01845 104 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tex52Q3TTI8 308 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Prss35Q8C0F9 409 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 FetubQ9QXC1 388 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm14124A2AU83 715 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Prdx2Q61171 198 aaKnown RBP10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Pafah1b2Q61206 229 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Cxxc4Q6NXI8 198 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Fam234aQ8C0Z1 555 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Nrn1Q8CFV4 142 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Vmn1r179Q8R2B4 323 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ptrh2Q8R2Y8 181 aaKnown RBP10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr513Q8VFZ3 309 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 CcsQ9WU84 274 aa10.76□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm20219A0A1B0GRQ3 87 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr898L7N1Z5 316 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 FasP25446 327 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Rab7aP51150 207 aaKnown RBP10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Hhipl1Q14DK5 791 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm5148Q8BGG2 154 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Mrpl13Q9D1P0 178 aaKnown RBP10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Opn3Q9WUK7 400 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Med13lQ6JPI3 2207 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm3045A0A1D5RMA1 209 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm765B2RVL9 189 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Defa30E9QPZ2 93 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Fam3dP97805 223 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Znrf1Q91V17 227 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tmem100Q9CQG9 134 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 H2al3Q9D4U4 128 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Cldn23Q9D7D7 296 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tmub1Q9JMG3 245 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 St6galnac3Q9WUV2 305 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm28171A0A087WQ19 227 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm20773A0A0A6YXW2 232 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm20807A0A0A6YXX7 232 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm20873J3QMQ9 232 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm20795J3QP49 232 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Pate4Q09098 99 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm21440Q3TTD8 232 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 B020031M17RikQ3UT11 173 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr1362Q5SZZ8 308 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr924Q7TRB8 308 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Prrg4Q8BGN6 226 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Hif1anQ8BLR9 349 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Rnase4Q9JJH1 148 aa10.75□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm15293D3YX02 93 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm10271F6WY25 52 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 ApcsP12246 224 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Hoxa1P09022 331 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 P18528 98 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Defa9P50707 93 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gnb2P62880 340 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Bcl2l2P70345 193 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Vmn1r195Q5SVD6 316 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tmem167bQ80X45 74 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Slc37a1Q8R070 531 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr195Q8VGQ6 308 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ppp1r27Q9D119 154 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Dram1Q9DC58 238 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ascl3Q9JJR7 174 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Dcaf10A2AKB9 566 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 1700031F05RikB1AX30 191 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 A630076J17RikJ3QQ32 107 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Iglc2P01844 104 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Jsrp1Q3MI48 332 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 GfralQ6SJE0 393 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr153Q7TR48 307 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 BsxQ810B3 232 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm5868Q8BJG1 145 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Olfr530Q8VFE8 307 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Prss37Q9DAA4 237 aa10.74□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Iglv3A0A0B4J1K5 122 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ceacam15A0A0B4J1L0 234 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gm3512L7N206 146 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tctn2Q2MV57 700 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Gpr87Q99MT7 358 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Ube2l6Q9QZU9 153 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Zfp941Q3URY5 674 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Arrdc5Q497K5 325 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 SlaQ60898 281 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Tff3Q62395 81 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Msrb3Q8BU85 253 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Cd300eQ8K249 196 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Rspo1Q9Z132 265 aa10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP10.73□□□□□ -0.69
Clcn3-201ENSMUST00000004430 Pax1P09084 446 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms