RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
PHGDH-211ENST00000641213 MYO18BQ8IUG5 2567 aa13.1□□□□□ -0.31
PHGDH-211ENST00000641213 A0A1B0GV90 55 aa13.1□□□□□ -0.31
PHGDH-211ENST00000641213 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
PHGDH-211ENST00000641213 PRB1P04280 392 aa13.1□□□□□ -0.31
PHGDH-211ENST00000641213 ZNF138P52744 262 aa13.1□□□□□ -0.31
PHGDH-211ENST00000641213 BRI3O95415 125 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 TRBV12-3P01733 135 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 DSCR9P59020 149 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 SSTP61278 116 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 BLCAPP62952 87 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
PHGDH-211ENST00000641213 SPATA45Q537H7 98 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 C8orf86Q6ZUL3 223 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 SNHG12Q9BXW3 62 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 M0QZK8 103 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 Q6ZS46 218 aa13.09□□□□□ -0.31
PHGDH-211ENST00000641213 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 H3BUA1 57 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 CSN3P07498 182 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 IGLC6P0CF74 106 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 IL17RELQ6ZVW7 336 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 PSMG3-AS1Q96PY0 264 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 AGPAT4-IT1Q9H0P7 198 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 RAB4AP20338 218 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 ATOH7Q8N100 152 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 GLMPQ8WWB7 406 aa13.08□□□□□ -0.32
PHGDH-211ENST00000641213 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
PHGDH-211ENST00000641213 M0R143 59 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 ORM1P02763 201 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 FAM104BQ5XKR9 115 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 UNQ9165/PRO28630Q6UXU0 137 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 SPATA12Q7Z6I5 190 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 TMEM70Q9BUB7 260 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 KLK15Q9H2R5 256 aa13.07□□□□□ -0.32
PHGDH-211ENST00000641213 NDUFA4O00483 81 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 LEPROTL1O95214 131 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 GATA3P23771 443 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
PHGDH-211ENST00000641213 SLC25A16P16260 332 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 CYB5R2Q6BCY4 276 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 AMN1Q8IY45 258 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 U3KQK5 164 aa13.06□□□□□ -0.32
PHGDH-211ENST00000641213 SMAD7O15105 426 aaKnown RBP13.05□□□□□ -0.32
PHGDH-211ENST00000641213 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-211ENST00000641213 IGHV3-11P01762 117 aa13.05□□□□□ -0.32
PHGDH-211ENST00000641213 PF4V1P10720 104 aa13.05□□□□□ -0.32
PHGDH-211ENST00000641213 MAJINQ3KP22 176 aa13.05□□□□□ -0.32
PHGDH-211ENST00000641213 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
PHGDH-211ENST00000641213 BBC3Q96PG8 261 aaPredicted RBP13.05□□□□□ -0.32
PHGDH-211ENST00000641213 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
PHGDH-211ENST00000641213 D6R8Y8 96 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 TWIST1Q15672 202 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 IGLV1-40P01703 118 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 C9orf47Q6ZRZ4 202 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 C16orf92Q96LL3 132 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 CSPG4Q6UVK1 2322 aa13.04□□□□□ -0.32
PHGDH-211ENST00000641213 SYS1-DBNDD2H3BUS1 97 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 IGLC3P0DOY3 106 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
PHGDH-211ENST00000641213 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 MRPL52Q86TS9 123 aaKnown RBP13.03□□□□□ -0.32
PHGDH-211ENST00000641213 LINC01356Q8N9X3 169 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 AP5S1Q9NUS5 200 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 A0A096LNT2 108 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 PRELID3AQ96N28 172 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 CNFNQ9BYD5 112 aa13.03□□□□□ -0.32
PHGDH-211ENST00000641213 TRAV9-2A0A087WT02 112 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
PHGDH-211ENST00000641213 CFHR3Q02985 330 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 C9orf139Q6ZV77 190 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 GPHB5Q86YW7 130 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 ORMDL3Q8N138 153 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 C20orf173Q96LM9 149 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 PPP1R14DQ9NXH3 145 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 C11orf21Q9P2W6 132 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 UQCR10Q9UDW1 63 aa13.02□□□□□ -0.33
PHGDH-211ENST00000641213 COX6B1P14854 86 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 IFI27P40305 119 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-211ENST00000641213 SRSF1Q07955 248 aaKnown RBP eCLIP13.01□□□□□ -0.332e-10■■■□□ 18.2
PHGDH-211ENST00000641213 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 KLHDC1Q8N7A1 406 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 MSRB1Q9NZV6 116 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 LINC00469Q8N7U9 141 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 NPFFR1Q9GZQ6 430 aa13.01□□□□□ -0.33
PHGDH-211ENST00000641213 TMEM191AQ9H0A3 160 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms