RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 LINC01545Q5VT33 79 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM14EPQ6UXP3 125 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 TTC9CQ8N5M4 171 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 DEFB119Q8N690 84 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 OR4B1Q8NGF8 309 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 OR8D4Q8NGM9 314 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 NAT14Q8WUY8 206 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 LCN9Q8WX39 176 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 PRELID3AQ96N28 172 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 AQP10Q96PS8 301 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 VAMP8Q9BV40 100 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 SNRNP25Q9BV90 132 aaKnown RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 MRPL32Q9BYC8 188 aaKnown RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 DPY30Q9C005 99 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 OTORQ9NRC9 128 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 OSTCQ9NRP0 149 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 RPRMQ9NS64 109 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 BET1LQ9NYM9 111 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 IL36BQ9NZH7 164 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 MPC1Q9Y5U8 109 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 KDM6AO15550 1401 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 PRG4Q92954 1404 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 KIAA1107Q9UPP5 1409 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 HECW2Q9P2P5 1572 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 DSPPQ9NZW4 1301 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 NCAPD3P42695 1498 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 MYOM2P54296 1465 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 MAGI1Q96QZ7 1491 aaPredicted RBP1.11□□□□□ -2.23
CCDC7-216ENST00000640058 SMARCA4P51532 1647 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 AKAP12Q02952 1782 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 MYH7P12883 1935 aa1.11□□□□□ -2.23
CCDC7-216ENST00000640058 SCN10AQ9Y5Y9 1956 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 KIF13BQ9NQT8 1826 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 ADGBQ8N7X0 1667 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 NISCHQ9Y2I1 1504 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 DOCK3Q8IZD9 2030 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF106Q9H2Y7 1883 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 CLIP1P30622 1438 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 EEA1Q15075 1411 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TCRBV3S1A0A5B6 114 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 ODAMA1E959 279 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 FAM24AA6NFZ4 105 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HMSDA8MTL9 139 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM256-PLSCR3K7ERE1 68 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 UQCRQO14949 82 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 KLF7O75840 302 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TRACP01848 142 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 MSMBP08118 114 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TRAPPC2P0DI81 140 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TRAPPC2BP0DI82 140 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TPT1P13693 172 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HLA-DRB4P13762 266 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HLA-DMBP28068 263 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 DYNLT3P51808 116 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 FOXA3P55318 350 aaPredicted RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 BTG2P78543 158 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 QRFPP83859 136 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 RPL18Q07020 188 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 CATR1Q13166 79 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 IQCJQ1A5X6 159 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 Q1T7F1 81 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 Q56UQ5 140 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 C22orf39Q6P5X5 142 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 DPPA3Q6W0C5 159 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 RPS19BP1Q86WX3 136 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 BPIFA4PQ86YQ2 179 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HIST3H2BBQ8N257 126 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 C5orf17Q8NAS9 161 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 PLPP5Q8NEB5 264 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 PSMF1Q92530 271 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 SCGB3A1Q96QR1 104 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 S100A13Q99584 98 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BLQ99880 126 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 NAA38Q9BRA0 125 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 SEC11CQ9BY50 192 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 NPCDR1Q9BY65 106 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM133Q9H2Q1 129 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 MED9Q9NWA0 146 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 FKBP11Q9NYL4 201 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 COMMD3Q9UBI1 195 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 EPDR1Q9UM22 224 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 TPRKBQ9Y3C4 175 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 HLA-DRB4X5D2U9 266 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 PZPP20742 1482 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 BCL9LQ86UU0 1499 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 NEO1Q92859 1461 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 ARHGAP35Q9NRY4 1499 aa1.1□□□□□ -2.23
CCDC7-216ENST00000640058 XIRP1Q702N8 1843 aaKnown RBP1.1□□□□□ -2.23
CCDC7-216ENST00000640058 CCDC88AQ3V6T2 1871 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 TROQ12816 1431 aaPredicted RBP1.09□□□□□ -2.23
CCDC7-216ENST00000640058 ARHGAP31Q2M1Z3 1444 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 TRAV12-2A0A075B6T6 113 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 A0A0D9SG52 128 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 TRBV27A0A0K0K1C4 114 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 C3orf85A0A1B0GTC6 90 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 FAM236AA0A1B0GUQ0 79 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 LOC100130705A0A1B0GUX0 176 aa1.09□□□□□ -2.23
CCDC7-216ENST00000640058 FAM236BA0A1B0GV22 79 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms