RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 H0Y980 276 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 M0R2P5 195 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CXCR6O00574 342 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 PFDN6O15212 129 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TGOLN2O43493 480 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 BCE1O60756 84 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 E2F6O75461 281 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 ERC2-IT1O76042 136 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CNIH1O95406 144 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 APOC1P02654 83 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SMR3BP02814 79 aaPredicted RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 MT1EP04732 61 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SERPINE1P05121 402 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 RBP1P09455 135 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 COX8AP10176 69 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 ACYP2P14621 99 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 PDE6GP18545 87 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 MYL12AP19105 171 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 PPIBP23284 216 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SDC4P31431 198 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 S100A5P33763 92 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SULT1A1P50225 295 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TAS2R41P59536 307 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 UBE2D3P61077 147 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 NAA20P61599 178 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 VBP1P61758 197 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 UBE2D2P62837 147 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 EIF5AP63241 154 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 HBA1P69905 142 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 H3F3AP84243 136 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TAF1AQ15573 450 aaPredicted RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 NEDD8Q15843 81 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 IMPG1Q17R60 797 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 ESRGQ1W209 222 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 AKIRIN2Q53H80 203 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 BRMS1LQ5PSV4 323 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 C8orf74Q6P047 294 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 C22orf39Q6P5X5 142 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CLPSL2Q6UWE3 100 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 C4orf22Q6V702 233 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 DEFB132Q7Z7B7 95 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 AKAP14Q86UN6 197 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SNX29P2Q8IUI4 249 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR5AS1Q8N127 324 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 GDPD1Q8N9F7 314 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 WFDC9Q8NEX5 89 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR5D14Q8NGL3 314 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR13C4Q8NGS5 318 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR10K1Q8NGX5 313 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 Q8TAT8 98 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 DNAJC9Q8WXX5 260 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 H1FXQ92522 213 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 RAB37Q96AX2 223 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 GPR146Q96CH1 333 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TMEM141Q96I45 108 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 ARL5BQ96KC2 179 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 AP1S3Q96PC3 154 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR4C12Q96R67 309 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OR52E6Q96RD3 313 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 NIPSNAP1Q9BPW8 284 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 GGACTQ9BVM4 153 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 PBOV1Q9GZY1 135 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CHMP4BQ9H444 224 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TAF9BQ9HBM6 251 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 BCL2L10Q9HD36 194 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 C14orf132Q9NPU4 83 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 OSTCQ9NRP0 149 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 IMP3Q9NV31 184 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 NHP2Q9NX24 153 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SCN3BQ9NY72 215 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 BET1LQ9NYM9 111 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 MRPL35Q9NZE8 188 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 MRPL36Q9P0J6 103 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 NAT8BQ9UHF3 227 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SCP2D1Q9UJQ7 156 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SLC22A13Q9Y226 551 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 UTP11Q9Y3A2 253 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 LY96Q9Y6Y9 160 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 HTTP42858 3142 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 BIVM-ERCC5R4GMW8 1640 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 MYH9P35579 1960 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 TANC2Q9HCD6 1990 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SLIT1O75093 1534 aa-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 SPTBN5Q9NRC6 3674 aaKnown RBP-0.28□□□□□ -2.45
CCDC7-211ENST00000638889 CECR2Q9BXF3 1484 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 TNS3Q68CZ2 1445 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 SMG6Q86US8 1419 aaKnown RBP-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 KIF13BQ9NQT8 1826 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 LAMB1P07942 1786 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 ABCC11Q96J66 1382 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 CSMD2Q7Z408 3487 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 A0A0J9YY99 117 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 TEX49A0A1B0GTD5 131 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 TMEM30CPA0ZSE6 113 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 C9orf170A2RU37 121 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 FAM159BA6NKW6 160 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 BBIP1A8MTZ0 92 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 HIGD1CA8MV81 97 aa-0.29□□□□□ -2.46
CCDC7-211ENST00000638889 E7EUB6 86 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms