RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 EVI2AP22794 236 aa8.49□□□□□ -1.05
SNIP1-204ENST00000638725 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
SNIP1-204ENST00000638725 LINC01560Q8TB33 94 aa8.49□□□□□ -1.05
SNIP1-204ENST00000638725 ARPC1AQ92747 370 aa8.49□□□□□ -1.05
SNIP1-204ENST00000638725 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
SNIP1-204ENST00000638725 ACACAQ13085 2346 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 GATA1P15976 413 aaPredicted RBP8.48□□□□□ -1.05
SNIP1-204ENST00000638725 PPIFP30405 207 aaKnown RBP8.48□□□□□ -1.05
SNIP1-204ENST00000638725 LEPP41159 167 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 ERCC8Q13216 396 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 ZNF48Q96MX3 618 aaPredicted RBP8.48□□□□□ -1.05
SNIP1-204ENST00000638725 SPCS1Q9Y6A9 102 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 AKAP13Q12802 2813 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 LY6G5BQ8NDX9 201 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
SNIP1-204ENST00000638725 NCBP2LA6PVI3 153 aaKnown RBP8.47□□□□□ -1.05
SNIP1-204ENST00000638725 TNFRSF6BO95407 300 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 GCSHP23434 173 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 ODF1Q14990 250 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 DYNAPQ8N1N2 210 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 GVINP1Q7Z2Y8 2422 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 PRAC2D3DTV9 90 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 CTSGP08311 255 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 FXYD2P54710 66 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 ZNF562Q6V9R5 426 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 TTC9CQ8N5M4 171 aa8.47□□□□□ -1.05
SNIP1-204ENST00000638725 G3V4G9 280 aa8.46□□□□□ -1.05
SNIP1-204ENST00000638725 PRSS1P07477 247 aa8.46□□□□□ -1.05
SNIP1-204ENST00000638725 FCER1GP30273 86 aa8.46□□□□□ -1.05
SNIP1-204ENST00000638725 CEACAM3P40198 252 aa8.46□□□□□ -1.05
SNIP1-204ENST00000638725 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.05
SNIP1-204ENST00000638725 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
SNIP1-204ENST00000638725 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.06
SNIP1-204ENST00000638725 NPFFR1Q9GZQ6 430 aa8.46□□□□□ -1.06
SNIP1-204ENST00000638725 ANKRD11Q6UB99 2663 aaPredicted RBP8.46□□□□□ -1.06
SNIP1-204ENST00000638725 NEGR1Q7Z3B1 354 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 RNF182Q8N6D2 247 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 TMEM158Q8WZ71 300 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 FOXC2Q99958 501 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 CNFNQ9BYD5 112 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 K7ERJ3 54 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 GRNP28799 593 aaKnown RBP8.45□□□□□ -1.06
SNIP1-204ENST00000638725 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 GTSCR1Q86UQ5 136 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 CHAC1Q9BUX1 264 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
SNIP1-204ENST00000638725 PIEZO2Q9H5I5 2752 aa8.45□□□□□ -1.06
SNIP1-204ENST00000638725 IGKCP01834 107 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 FABP2P12104 132 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 TTC28Q96AY4 2481 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 SRSF2Q01130 221 aaKnown RBP8.44□□□□□ -1.06
SNIP1-204ENST00000638725 LINC01559Q495D7 138 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV3-66A0A0C4DH42 116 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 FAM90A27PA6NNH2 459 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 K7EMI3 77 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 TRGV3P03979 118 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 ZC2HC1BQ5TFG8 222 aa8.44□□□□□ -1.06
SNIP1-204ENST00000638725 DCHS2Q6V1P9 2916 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 TRBV25-1A0A075B6N4 114 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 PRTN3P24158 256 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 C11orf21Q9P2W6 132 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV3OR16-13A0A075B7E8 117 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV3-74A0A0B4J1X5 117 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 IGKV3D-20A0A0C4DH25 116 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 TMEM8BA6NDV4 472 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 ABCA4P78363 2273 aa8.43□□□□□ -1.06
SNIP1-204ENST00000638725 IGLV2-18A0A075B6J9 118 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 IGHV7-81A0A0B4J1V7 117 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 DPM2O94777 84 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 VMO1Q7Z5L0 202 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 Q8N6K4 173 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 Q8N8P6 123 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 TMEM160Q9NX00 188 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 NHP2Q9NX24 153 aaKnown RBP8.42□□□□□ -1.06
SNIP1-204ENST00000638725 TRAV26-2A0A0B4J265 109 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 TRAV40A0A0B4J280 105 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 M0R1W7 72 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 SCGB2A1O75556 95 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 SMIM17P0DL12 118 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 TMEM11P17152 192 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 LRBAP50851 2863 aa8.42□□□□□ -1.06
SNIP1-204ENST00000638725 ATP5LO75964 103 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
SNIP1-204ENST00000638725 MRPL35Q9NZE8 188 aaKnown RBP8.41□□□□□ -1.06
SNIP1-204ENST00000638725 TMEM238C9JI98 176 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 BUB3O43684 328 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 C15orf32Q32M92 178 aa8.41□□□□□ -1.06
SNIP1-204ENST00000638725 Q6ZQT7 251 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms