RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 TCF24Q7RTU0 167 aa9.31□□□□□ -0.92
CACNA1D-228ENST00000638120 WIPF2Q8TF74 440 aaPredicted RBP9.31□□□□□ -0.92
CACNA1D-228ENST00000638120 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
CACNA1D-228ENST00000638120 GPR61Q9BZJ8 451 aa9.31□□□□□ -0.92
CACNA1D-228ENST00000638120 MRPL18Q9H0U6 180 aaKnown RBP9.31□□□□□ -0.92
CACNA1D-228ENST00000638120 TMEM213A2RRL7 107 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 LGALS9O00182 355 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 EDN2P20800 178 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 BMI1P35226 326 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 CDX1P47902 265 aaPredicted RBP9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 COA6Q5JTJ3 125 aaKnown RBP9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 ATP5L2Q7Z4Y8 100 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 NDFIP1Q9BT67 221 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 ACANP16112 2415 aa9.3□□□□□ -0.92
CACNA1D-228ENST00000638120 HLA-DQA1P01909 254 aa9.29□□□□□ -0.92
CACNA1D-228ENST00000638120 ERCC8Q13216 396 aa9.29□□□□□ -0.92
CACNA1D-228ENST00000638120 FAM162BQ5T6X4 162 aa9.29□□□□□ -0.92
CACNA1D-228ENST00000638120 C20orf173Q96LM9 149 aa9.29□□□□□ -0.92
CACNA1D-228ENST00000638120 ANK3Q12955 4377 aaKnown RBP9.29□□□□□ -0.92
CACNA1D-228ENST00000638120 A0A1B0GXF2 115 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 XKRY2A2RUG3 117 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 SH2D1AO60880 128 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 RNASE1P07998 156 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 HOXD3P31249 432 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 SYNJ2BPP57105 145 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 RPL11P62913 178 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 SMUG1Q53HV7 270 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 TCTEX1D4Q5JR98 221 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 RBPMS2Q6ZRY4 209 aaKnown RBP9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 C9orf47Q6ZRZ4 202 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 AGPAT4-IT1Q9H0P7 198 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 FOXA3P55318 350 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 TMEM78Q5T7P6 136 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 GFI1BQ5VTD9 330 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 C4orf3Q8WVX3 66 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 PPP1R14DQ9NXH3 145 aa9.28□□□□□ -0.92
CACNA1D-228ENST00000638120 MYO9AB2RTY4 2548 aa9.27□□□□□ -0.92
CACNA1D-228ENST00000638120 IFITM10A6NMD0 228 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 GZMBP10144 247 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 SRD5A1P18405 259 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 ZNF138P52744 262 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 RAB4BP61018 213 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 SAMD13Q5VXD3 122 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 SMR3AQ99954 134 aa9.27□□□□□ -0.93
CACNA1D-228ENST00000638120 S100A8P05109 93 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 Q6AWC8 147 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 ZNF418Q8TF45 676 aaPredicted RBP9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 IGKV3-7A0A075B6H7 116 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 OVOL1O14753 267 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 HILS1P60008 231 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 HBBP68871 147 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 SRSF2Q01130 221 aaKnown RBP9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 DEFB136Q30KP8 78 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
CACNA1D-228ENST00000638120 TMEM189A5PLL7 270 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 C2orf70A6NJV1 201 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 LINC01619G3V211 115 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 LY6G6DO95868 133 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 PDZD11Q5EBL8 140 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 KHDC1LQ5JSQ8 128 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 WFDC12Q8WWY7 111 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 SELENOKQ9Y6D0 94 aa9.25□□□□□ -0.93
CACNA1D-228ENST00000638120 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 APCSP02743 223 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 CRISP2P16562 243 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 SLURP1P55000 103 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 SLAQ13239 276 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 LINC00518Q8N0U6 118 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 OR10J6PQ8NGY7 276 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 C16orf95Q9H693 158 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 GRIFINA4D1Z8 144 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 HAX1O00165 279 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 ZNF705DP0CH99 300 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 ZNF705BP0CI00 300 aaPredicted RBP9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 S100A2P29034 98 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 ID1P41134 155 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 CAMPP49913 170 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 RPS20P60866 119 aaKnown RBP9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 OR11H1Q8NG94 326 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 DPF1Q92782 380 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
CACNA1D-228ENST00000638120 TMSB15BA0A087X1C1 80 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 A0A1B0GUT8 65 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 KIAA1644Q3SXP7 199 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 OR1N2Q8NGR9 330 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 MS4A6AQ9H2W1 248 aa9.23□□□□□ -0.93
CACNA1D-228ENST00000638120 A0A1B0GUS0 222 aa9.22□□□□□ -0.93
CACNA1D-228ENST00000638120 M0QZ24 198 aa9.22□□□□□ -0.93
CACNA1D-228ENST00000638120 ARMS2P0C7Q2 107 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms