RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 RBAKDNA6NC62 111 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 H3BUA1 57 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 KLK15Q9H2R5 256 aa16.51■□□□□ 0.23
CLN6-224ENST00000638076 SRSF1Q07955 248 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLN6-224ENST00000638076 UNQ9165/PRO28630Q6UXU0 137 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 ZNF843Q8N446 348 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 USMG5Q96IX5 58 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 BRI3O95415 125 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 IGHV3-11P01762 117 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 PMCHL1Q16048 86 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 LINC01356Q8N9X3 169 aa16.5■□□□□ 0.23
CLN6-224ENST00000638076 CHCHD1Q96BP2 118 aaKnown RBP16.5■□□□□ 0.23
CLN6-224ENST00000638076 ZFYVE26Q68DK2 2539 aa16.49■□□□□ 0.23
CLN6-224ENST00000638076 PF4V1P10720 104 aa16.49■□□□□ 0.23
CLN6-224ENST00000638076 C20orf144Q9BQM9 153 aa16.49■□□□□ 0.23
CLN6-224ENST00000638076 TMEM213A2RRL7 107 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 LINC00614P0C842 121 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 EBLN2Q6P2I7 272 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 ZNF493Q6ZR52 646 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 IL17RELQ6ZVW7 336 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 ZNF462Q96JM2 2506 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 MUC21A0A0G2JKD1 596 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 MUC21A0A140T8X8 626 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 NDUFA4O00483 81 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 RPS20P60866 119 aaKnown RBP16.48■□□□□ 0.23
CLN6-224ENST00000638076 MUC21Q5SSG8 566 aa16.48■□□□□ 0.23
CLN6-224ENST00000638076 FBN2P35556 2912 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 A0A096LNT2 108 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 FABP5P3A8MUU1 101 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 ZNF138P52744 262 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 LCNL1Q6ZST4 164 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 MAPK1IP1LQ8NDC0 245 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 GLMPQ8WWB7 406 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 AGPAT4-IT1Q9H0P7 198 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 A0A1B0GV90 55 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 ORM1P02763 201 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 ZNF575Q86XF7 245 aa16.47■□□□□ 0.23
CLN6-224ENST00000638076 IGHV1-24A0A0C4DH33 117 aa16.46■□□□□ 0.23
CLN6-224ENST00000638076 SMAD7O15105 426 aaKnown RBP16.46■□□□□ 0.23
CLN6-224ENST00000638076 FER1L6-AS1Q8NA97 138 aa16.46■□□□□ 0.23
CLN6-224ENST00000638076 MRPL53Q96EL3 112 aaKnown RBP16.46■□□□□ 0.23
CLN6-224ENST00000638076 C2orf70A6NJV1 201 aa16.46■□□□□ 0.23
CLN6-224ENST00000638076 CSN3P07498 182 aa16.46■□□□□ 0.23
CLN6-224ENST00000638076 SRSF2Q01130 221 aaKnown RBP16.46■□□□□ 0.23
CLN6-224ENST00000638076 CLEC5AQ9NY25 188 aa16.46■□□□□ 0.23
CLN6-224ENST00000638076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.46■□□□□ 0.221e-6■■□□□ 12.3
CLN6-224ENST00000638076 IGLV1-40P01703 118 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 BTF3P20290 206 aaKnown RBP16.45■□□□□ 0.22
CLN6-224ENST00000638076 DEFB112Q30KQ8 113 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 OR4X2Q8NGF9 303 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 C16orf92Q96LL3 132 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 IGLC6P0CF74 106 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 CTRLP40313 264 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 TMEM78Q5T7P6 136 aa16.45■□□□□ 0.22
CLN6-224ENST00000638076 TGFAP01135 160 aa16.44■□□□□ 0.22
CLN6-224ENST00000638076 IGHV4-59P01825 116 aa16.44■□□□□ 0.22
CLN6-224ENST00000638076 CFHR3Q02985 330 aa16.43■□□□□ 0.22
CLN6-224ENST00000638076 LBHQ53QV2 105 aaPredicted RBP16.43■□□□□ 0.22
CLN6-224ENST00000638076 FAM104BQ5XKR9 115 aa16.43■□□□□ 0.22
CLN6-224ENST00000638076 AMN1Q8IY45 258 aa16.43■□□□□ 0.22
CLN6-224ENST00000638076 MIEN1Q9BRT3 115 aa16.43■□□□□ 0.22
CLN6-224ENST00000638076 A0A0G2JLM5 398 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 TWIST1Q15672 202 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 TMEM95Q3KNT9 176 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 SPATA45Q537H7 98 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 ZNF705AQ6ZN79 300 aaPredicted RBP16.42■□□□□ 0.22
CLN6-224ENST00000638076 LINC01559Q495D7 138 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 C9orf139Q6ZV77 190 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 ATOH7Q8N100 152 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 PSMG3-AS1Q96PY0 264 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 NPFFR1Q9GZQ6 430 aa16.42■□□□□ 0.22
CLN6-224ENST00000638076 FAM208BQ5VWN6 2430 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 D6R8Y8 96 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 C9orf47Q6ZRZ4 202 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 J3QLI3 93 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 LEPROTL1O95214 131 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 DMRTA1Q5VZB9 504 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 GPHB5Q86YW7 130 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 C20orf173Q96LM9 149 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 TMEM70Q9BUB7 260 aa16.41■□□□□ 0.22
CLN6-224ENST00000638076 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
CLN6-224ENST00000638076 EREGO14944 169 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 RAB4AP20338 218 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 LINC00173Q6ZV60 143 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 CSPG4Q6UVK1 2322 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 RNF223E7ERA6 249 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 KRTAP10-9P60411 292 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 ZNF124Q15973 351 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 SPATA12Q7Z6I5 190 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 C2orf88Q9BSF0 95 aa16.4■□□□□ 0.22
CLN6-224ENST00000638076 ZNF738Q8NE65 137 aa16.39■□□□□ 0.21
CLN6-224ENST00000638076 U3KQK5 164 aa16.39■□□□□ 0.21
CLN6-224ENST00000638076 ANKRD17O75179 2603 aaKnown RBP16.39■□□□□ 0.21
CLN6-224ENST00000638076 HIST1H1AQ02539 215 aaPredicted RBP16.39■□□□□ 0.21
CLN6-224ENST00000638076 MRPL51Q4U2R6 128 aaKnown RBP16.39■□□□□ 0.21
CLN6-224ENST00000638076 PRSS3P2Q8NHM4 247 aa16.39■□□□□ 0.21
CLN6-224ENST00000638076 SNHG12Q9BXW3 62 aa16.39■□□□□ 0.21
CLN6-224ENST00000638076 AP5S1Q9NUS5 200 aa16.39■□□□□ 0.21
CLN6-224ENST00000638076 IGKV3D-20A0A0C4DH25 116 aa16.38■□□□□ 0.21
CLN6-224ENST00000638076 ORMDL3Q8N138 153 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms