RNA–Protein interactions for RNA: ENST00000637844.1

CACNA1D-227, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-227ENST00000637844 SPTAN1Q13813 2472 aaKnown RBP4.79□□□□□ -1.64
CACNA1D-227ENST00000637844 HECTD1Q9ULT8 2610 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 CRYBG3Q68DQ2 2970 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 A0A1B0GW15 77 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 C5orf52A6NGY3 159 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 C2orf70A6NJV1 201 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 PRAC2D3DTV9 90 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HAX1O00165 279 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BKO60814 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 SH2D1AO60880 128 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BJP06899 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BOP23527 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 S100A2P29034 98 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BBP33778 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 SLURP1P55000 103 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BDP58876 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 SNRPEP62304 92 aaKnown RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BCP62807 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 SRSF2Q01130 221 aaKnown RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H1AQ02539 215 aaPredicted RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 ERCC8Q13216 396 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 RIGQ13278 110 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 KLF5Q13887 457 aaPredicted RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST2H2BEQ16778 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 TCTEX1D4Q5JR98 221 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 MRPL54Q6P161 138 aaKnown RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 EBLN2Q6P2I7 272 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 WFDC3Q8IUB2 231 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 NUP35Q8NFH5 326 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 OR9G4Q8NGQ1 327 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 LINC01006Q8NI28 216 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 Q8TAT8 98 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BHQ93079 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 C8orf49Q96NF6 230 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BNQ99877 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 HIST1H2BMQ99879 126 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 SMR3AQ99954 134 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 AGPAT4-IT1Q9H0P7 198 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 MS4A6AQ9H2W1 248 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 RNF114Q9Y508 228 aa4.78□□□□□ -1.64
CACNA1D-227ENST00000637844 APCP25054 2843 aa4.78□□□□□ -1.65
CACNA1D-227ENST00000637844 TRAV2A0A0B4J234 112 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 TRBV7-9A0A0J9YWB2 115 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 A0A1B0GUT8 65 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 UBE2CO00762 179 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 SOCS3O14543 225 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 DUSP14O95147 198 aaKnown RBP4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 APCSP02743 223 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 ORM1P02763 201 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 CD28P10747 220 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 TFPI2P48307 235 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 AKR1D1P51857 326 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 FOXA3P55318 350 aaPredicted RBP4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 HBBP68871 147 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 DEFB136Q30KP8 78 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 LINC00322Q6ZN03 302 aaPredicted RBP4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 OR8A1Q8NGG7 326 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 SPG11Q96JI7 2443 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 CELSR2Q9HCU4 2923 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 MED13LQ71F56 2210 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 CSMD2Q7Z408 3487 aa4.77□□□□□ -1.65
CACNA1D-227ENST00000637844 TMSB15BA0A087X1C1 80 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 TRAV21A0A0B4J279 112 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 A0A1B0GUS0 222 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 A0A1W2PRX2 142 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 OR4C46A6NHA9 309 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 K7EQG2 157 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 CCL24O00175 119 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 GPX1P07203 203 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 CRISP2P16562 243 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 HOXA5P20719 270 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 LEPP41159 167 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 CAMPP49913 170 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 CRIP1P50238 77 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 PSMG4Q5JS54 123 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 TMEM136Q6ZRR5 245 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 C18orf65Q6ZTR6 163 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 DCANP1Q8TF63 244 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 C20orf173Q96LM9 149 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 TPPP3Q9BW30 176 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 GPR61Q9BZJ8 451 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 VPS13CQ709C8 3753 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 PDZD2O15018 2839 aa4.76□□□□□ -1.65
CACNA1D-227ENST00000637844 TRAV25A0A0B4J276 109 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 F2Z2F3 143 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 PHOX2AO14813 284 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 ZNF688P0C7X2 276 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 GZMBP10144 247 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 EDN2P20800 178 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 TSPOP30536 169 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 LINC01559Q495D7 138 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 SMIM15Q7Z3B0 74 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
CACNA1D-227ENST00000637844 C11orf44Q8N8P7 122 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms