RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 PGPEP1LA6NFU8 196 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 C9JQL5 133 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 SPRY2O43597 315 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 NMBP08949 121 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 PSG9Q00887 426 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 C1orf158Q8N1D5 194 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 A8MZ25 164 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 TCRAP04437 139 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 TMEM75Q8N9X5 138 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF253O75346 499 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 AZU1P20160 251 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF80P51504 273 aaPredicted RBP6.18□□□□□ -1.42
CDKL5-209ENST00000635828 OTORQ9NRC9 128 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 EPDR1Q9UM22 224 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 HYDINQ4G0P3 5121 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 TRAV12-3A0A0B4J271 114 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 ATP6V1G1O75348 118 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 GFI1BQ5VTD9 330 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 TMEM167BQ9NRX6 74 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 C11orf94C9JXX5 98 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 NPIPB6E9PJ23 425 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 IFNA7P01567 189 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 S100A7P31151 101 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 EIF5AL1Q6IS14 154 aaKnown RBP6.18□□□□□ -1.42
CDKL5-209ENST00000635828 LYPD6BQ8NI32 183 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 RXFP4Q8TDU9 374 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 TM2D3Q9BRN9 247 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 TP53TG3Q9ULZ0 132 aa6.18□□□□□ -1.42
CDKL5-209ENST00000635828 PRNTQ86SH4 94 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 ZFAND2AQ8N6M9 145 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 OR10J6PQ8NGY7 276 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 CMTM2Q8TAZ6 248 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 DPPA3Q6W0C5 159 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 X6R8D5 127 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 TRBV20OR9-2A0A075B6H5 130 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 A0A1W2PRE2 83 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 RNASE4P34096 147 aaKnown RBP6.17□□□□□ -1.42
CDKL5-209ENST00000635828 RAB5CP51148 216 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 CEBPGP53567 150 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 TOR2AQ5JU69 321 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF767PQ75MW2 155 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF492Q9P255 531 aa6.17□□□□□ -1.42
CDKL5-209ENST00000635828 RAB19A4D1S5 217 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF705GA8MUZ8 300 aaPredicted RBP6.16□□□□□ -1.42
CDKL5-209ENST00000635828 PEX7O00628 323 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 EMP1P54849 157 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 MUC21Q5SSG8 566 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 C9orf47Q6ZRZ4 202 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 ZMAT5Q9UDW3 170 aaKnown RBP6.16□□□□□ -1.42
CDKL5-209ENST00000635828 TRAV1-1A0A0B4J248 108 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 A8MTW9 85 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 C5orf17Q8NAS9 161 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 OR11H2Q8NH07 326 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 PRELID1Q9Y255 219 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 CDKN1BP46527 198 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 CRIP1P50238 77 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 RCHY1Q96PM5 261 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 RNF24Q9Y225 148 aa6.16□□□□□ -1.42
CDKL5-209ENST00000635828 BCL2P10415 239 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 C2CD4CQ8TF44 421 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 A0A0J9YWU9 116 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 RNF183Q96D59 192 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 ATG101Q9BSB4 218 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 PSG8Q9UQ74 426 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
CDKL5-209ENST00000635828 ZNF324O75467 553 aaPredicted RBP6.15□□□□□ -1.43
CDKL5-209ENST00000635828 CSN1S1P47710 185 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 ZNF138P52744 262 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 APOC4P55056 127 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.43
CDKL5-209ENST00000635828 ZNF575Q86XF7 245 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 PPP1R14DQ9NXH3 145 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 CELA1Q9UNI1 258 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 DNAH1Q9P2D7 4330 aa6.15□□□□□ -1.43
CDKL5-209ENST00000635828 DYNC2H1Q8NCM8 4307 aaKnown RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 LOC102723971A0A1B0GUV8 181 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 RBFOX3A6NFN3 312 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 CYB561D1Q8N8Q1 229 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 MRPL53Q96EL3 112 aaKnown RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 KLLNB2CW77 178 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 RPL35P42766 123 aaKnown RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 ZC2HC1AQ96GY0 325 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 GPX1P07203 203 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 FLI1Q01543 452 aaPredicted RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 ZNF705AQ6ZN79 300 aaPredicted RBP6.14□□□□□ -1.43
CDKL5-209ENST00000635828 TREM1Q9NP99 234 aa6.14□□□□□ -1.43
CDKL5-209ENST00000635828 IGHV4-28A0A0C4DH34 117 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 CMC4P56277 68 aaPredicted RBP6.13□□□□□ -1.43
CDKL5-209ENST00000635828 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 Q6ZWC4 215 aa6.13□□□□□ -1.43
CDKL5-209ENST00000635828 Q86TA4 180 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms