RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	TMEM78	Q5T7P6	136 aa		18.97	■□□□□ 0.63
UBE3A-222	ENST00000630907	CSNK1G2-AS1	Q8NCQ2	148 aa		18.97	■□□□□ 0.63
UBE3A-222	ENST00000630907	ODF3	Q96PU9	254 aa		18.97	■□□□□ 0.63
UBE3A-222	ENST00000630907		U3KQK5	164 aa		18.97	■□□□□ 0.63
UBE3A-222	ENST00000630907	ARL2-SNX15	V9GYD0	113 aa		18.97	■□□□□ 0.63
UBE3A-222	ENST00000630907	TSPO	P30536	169 aa		18.96	■□□□□ 0.63
UBE3A-222	ENST00000630907	CCL20	P78556	96 aa		18.96	■□□□□ 0.63
UBE3A-222	ENST00000630907	GOLT1A	Q6ZVE7	132 aa		18.96	■□□□□ 0.63
UBE3A-222	ENST00000630907	EPDR1	Q9UM22	224 aa		18.96	■□□□□ 0.63
UBE3A-222	ENST00000630907	PAGE4	O60829	102 aa		18.95	■□□□□ 0.62
UBE3A-222	ENST00000630907	BLOC1S1	P78537	153 aa		18.95	■□□□□ 0.62
UBE3A-222	ENST00000630907	CST9LP1	Q5W188	147 aa		18.95	■□□□□ 0.62
UBE3A-222	ENST00000630907	NBEAL2	Q6ZNJ1	2754 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	SERTM2	A0A1B0GWG4	89 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	IFNA7	P01567	189 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	TCRA	P04437	139 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	LEP	P41159	167 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	CDKN1B	P46527	198 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	IGF2BP2-AS1	Q96M15	143 aa		18.94	■□□□□ 0.62
UBE3A-222	ENST00000630907	CRX	O43186	299 aa	Predicted RBP	18.93	■□□□□ 0.62
UBE3A-222	ENST00000630907	ZNF138	P52744	262 aa		18.93	■□□□□ 0.62
UBE3A-222	ENST00000630907	RARRES2	Q99969	163 aa		18.93	■□□□□ 0.62
UBE3A-222	ENST00000630907	ZNF492	Q9P255	531 aa		18.93	■□□□□ 0.62
UBE3A-222	ENST00000630907	TRAV12-2	A0A075B6T6	113 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907		K7EQM0	130 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	INS	P01308	110 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	TEX261	Q6UWH6	196 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	OR11H2	Q8NH07	326 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	FAM19A4	Q96LR4	140 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	GNG13	Q9P2W3	67 aa		18.92	■□□□□ 0.62
UBE3A-222	ENST00000630907	CCDC28A	Q8IWP9	274 aa		18.91	■□□□□ 0.62
UBE3A-222	ENST00000630907	ATG101	Q9BSB4	218 aa		18.91	■□□□□ 0.62
UBE3A-222	ENST00000630907	MANBAL	Q9NQG1	85 aa		18.91	■□□□□ 0.62
UBE3A-222	ENST00000630907	GOLT1B	Q9Y3E0	138 aa		18.91	■□□□□ 0.62
UBE3A-222	ENST00000630907	ATP5G3	P48201	142 aa		18.9	■□□□□ 0.62
UBE3A-222	ENST00000630907	CYB561D1	Q8N8Q1	229 aa		18.9	■□□□□ 0.62
UBE3A-222	ENST00000630907		Q8TAT8	98 aa		18.9	■□□□□ 0.62
UBE3A-222	ENST00000630907	TG	P01266	2768 aa		18.89	■□□□□ 0.62
UBE3A-222	ENST00000630907		J3KRW8	73 aa		18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	ZNF705A	Q6ZN79	300 aa	Predicted RBP	18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	C1orf158	Q8N1D5	194 aa		18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	ZNF680	Q8NEM1	530 aa		18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	HIST1H2BA	Q96A08	127 aa		18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	TCEAL7	Q9BRU2	100 aa		18.89	■□□□□ 0.61
UBE3A-222	ENST00000630907	TRAV8-1	A0A0A6YYK1	113 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	TRBV7-9	A0A0J9YWB2	115 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907		F6UZH7	168 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	PEX7	O00628	323 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	IFNA1	P01562	189 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	CRISP2	P16562	243 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	KIR3DS1	Q14943	382 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	LENEP	Q9Y5L5	61 aa		18.88	■□□□□ 0.61
UBE3A-222	ENST00000630907	TENM3	Q9P273	2699 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	IGHV3OR16-12	A0A075B7B8	117 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	NMB	P08949	121 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	PMS2P11	Q13670	270 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	GFI1B	Q5VTD9	330 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	SGK494	Q96LW2	274 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	TMEM208	Q9BTX3	173 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	COL7A1	Q02388	2944 aa		18.87	■□□□□ 0.61
UBE3A-222	ENST00000630907	KLLN	B2CW77	178 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907	C11orf94	C9JXX5	98 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907	ZFAND2A	Q8N6M9	145 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907	TMEM75	Q8N9X5	138 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907	PSG8	Q9UQ74	426 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907		X6R8D5	127 aa		18.86	■□□□□ 0.61
UBE3A-222	ENST00000630907	FBLL1	A6NHQ2	334 aa	Known RBP	18.85	■□□□□ 0.61
UBE3A-222	ENST00000630907	GPX1	P07203	203 aa		18.85	■□□□□ 0.61
UBE3A-222	ENST00000630907	LYPD6B	Q8NI32	183 aa		18.85	■□□□□ 0.61
UBE3A-222	ENST00000630907	C20orf144	Q9BQM9	153 aa		18.85	■□□□□ 0.61
UBE3A-222	ENST00000630907	RBMY1A1	P0DJD3	496 aa	Known RBP	18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	RBMY1C	P0DJD4	496 aa		18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	FLI1	Q01543	452 aa	Predicted RBP	18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	RBMY1F	Q15415	496 aa	Known RBP	18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	LINC00479	Q96M42	142 aa		18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	NEU1	Q99519	415 aa		18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	TXNDC17	Q9BRA2	123 aa		18.84	■□□□□ 0.61
UBE3A-222	ENST00000630907	C7orf71	A4D174	169 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	IGLV2-11	P01706	119 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	MIF	P14174	115 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	RNASE4	P34096	147 aa	Known RBP	18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	TMEM256	Q8N2U0	113 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	LINC01587	Q99440	93 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	NDFIP1	Q9BT67	221 aa		18.83	■□□□□ 0.6
UBE3A-222	ENST00000630907	TRAV12-3	A0A0B4J271	114 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	TRAV34	A0A0B4J273	112 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	SMIM9	A6NGZ8	99 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	BCL2	P10415	239 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	BTN1A1	Q13410	526 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	PRNT	Q86SH4	94 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	TREM1	Q9NP99	234 aa		18.82	■□□□□ 0.6
UBE3A-222	ENST00000630907	TAGLN2	P37802	199 aa	Known RBP	18.81	■□□□□ 0.6
UBE3A-222	ENST00000630907	PRR9	Q5T870	116 aa		18.81	■□□□□ 0.6
UBE3A-222	ENST00000630907	TVP23C	Q96ET8	276 aa		18.81	■□□□□ 0.6
UBE3A-222	ENST00000630907	NIPSNAP3B	Q9BS92	247 aa		18.81	■□□□□ 0.6
UBE3A-222	ENST00000630907	IGHV4-28	A0A0C4DH34	117 aa		18.8	■□□□□ 0.6
UBE3A-222	ENST00000630907	SCO2	A0A1W2PP80	73 aa		18.8	■□□□□ 0.6
UBE3A-222	ENST00000630907		H7BYZ3	331 aa		18.8	■□□□□ 0.6
UBE3A-222	ENST00000630907	AKR1C3	P42330	323 aa		18.8	■□□□□ 0.6
UBE3A-222	ENST00000630907		Q8NAQ8	132 aa		18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms