RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SRSF2Q01130 221 aaKnown RBP5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 OR5I1Q13606 314 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 NSUN5P1Q3KNT7 163 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 KCNIP4Q6PIL6 250 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 FAM231DQ6ZW35 169 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 COX8CQ7Z4L0 72 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 OR10J6PQ8NGY7 276 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 DYNLRB2Q8TF09 96 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 DCANP1Q8TF63 244 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 SGK494Q96LW2 274 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 IMMP2LQ96T52 175 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF492Q9P255 531 aa5.69□□□□□ -1.5
PTP4A1-206ENST00000627002 TRAV25A0A0B4J276 109 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 LOC100996750A0A140TA64 210 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 K7EQG2 157 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 CT45A10P0DMU9 189 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF138P52744 262 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 KRTAP10-3P60369 221 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 IBA57Q5T440 356 aaKnown RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 ADAMTSL5Q6ZMM2 481 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 RBPMS2Q6ZRY4 209 aaKnown RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 C9orf47Q6ZRZ4 202 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 GBGT1Q8N5D6 347 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 NHLRC2Q8NBF2 726 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 OR4B1Q8NGF8 309 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 DAZAP1Q96EP5 407 aaKnown RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 BTF3L4Q96K17 158 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 C20orf173Q96LM9 149 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 LINC00477Q96M19 166 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 PPP1R14DQ9NXH3 145 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 ANK3Q12955 4377 aaKnown RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 SONP18583 2426 aaKnown RBP5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 TLN2Q9Y4G6 2542 aa5.68□□□□□ -1.5
PTP4A1-206ENST00000627002 TRBV7-9A0A0J9YWB2 115 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 A6NJY4 79 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 COLCA2A8K830 154 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF705GA8MUZ8 300 aaPredicted RBP5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 PRAC2D3DTV9 90 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 NPIPB6E9PJ23 425 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 GATCO43716 136 aaKnown RBP5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 P01737 135 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 PF4P02776 101 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 ERCC8Q13216 396 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 DEFB114Q30KQ6 69 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 CT83Q5H943 113 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 HIST2H2BDQ6DRA6 164 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 PRR27Q6MZM9 219 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 YPEL4Q96NS1 127 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 PRR25Q96S07 402 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 VGLL1Q99990 258 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 IL36BQ9NZH7 164 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 V9GYV3 84 aa5.67□□□□□ -1.5
PTP4A1-206ENST00000627002 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 C19orf71A6NCJ1 209 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 OR4C46A6NHA9 309 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 PFN1P07737 140 aaKnown RBP5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 ZNF688P0C7X2 276 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 TFPI2P48307 235 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 ELOBQ15370 118 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 SMUG1Q53HV7 270 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 PSMG4Q5JS54 123 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 FAM162BQ5T6X4 162 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 OR8A1Q8NGG7 326 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 OR2K2Q8NGT1 345 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 Q8TAT8 98 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 ZC2HC1AQ96GY0 325 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 SPAG8Q99932 426 aaPredicted RBP5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 CITED1Q99966 193 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 AGPAT4-IT1Q9H0P7 198 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 SELENOKQ9Y6D0 94 aa5.66□□□□□ -1.5
PTP4A1-206ENST00000627002 TRBV24-1A0A075B6N3 115 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 A8MWL6 223 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 SAP30O75446 220 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 DUSP14O95147 198 aaKnown RBP5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 PRB4P10163 310 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 RAB5AP20339 215 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 CMC4P56277 68 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 HIST1H1AQ02539 215 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 CD300EQ496F6 205 aaPredicted RBP5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 EBLN2Q6P2I7 272 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 FOXI2Q6ZQN5 318 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 TMEM61Q8N0U2 210 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 FAM210BQ96KR6 192 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 C8orf49Q96NF6 230 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 ASCL2Q99929 193 aa5.65□□□□□ -1.5
PTP4A1-206ENST00000627002 PYGO2Q9BRQ0 406 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms