RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 PET100P0DJ07 73 aa11.21□□□□□ -0.61
DDB2-216ENST00000622878 RPL12P30050 165 aaKnown RBP11.21□□□□□ -0.61
DDB2-216ENST00000622878 ICAM4Q14773 271 aa11.21□□□□□ -0.61
DDB2-216ENST00000622878 ZNF503Q96F45 646 aa11.21□□□□□ -0.61
DDB2-216ENST00000622878 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.61
DDB2-216ENST00000622878 C17orf112F2Z3M2 114 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 F5H768 121 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 M0R2N4 97 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 SLC25A5P05141 298 aaKnown RBP11.2□□□□□ -0.62
DDB2-216ENST00000622878 CRISP2P16562 243 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 LINC00336Q6ZUF6 198 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 CCDC28AQ8IWP9 274 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 AAMDCQ9H7C9 122 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 MBD2Q9UBB5 411 aa11.2□□□□□ -0.62
DDB2-216ENST00000622878 A0A1B0GVY2 172 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 C7orf71A4D174 169 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 OR10J4P0C629 311 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 CD300CQ08708 224 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 PHYHIPLQ96FC7 376 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 VGLL1Q99990 258 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 LINC00467Q9BRT7 94 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 WFDC1Q9HC57 220 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 ALG5Q9Y673 324 aa11.19□□□□□ -0.62
DDB2-216ENST00000622878 IGLV2-18A0A075B6J9 118 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
DDB2-216ENST00000622878 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
DDB2-216ENST00000622878 NMBP08949 121 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
DDB2-216ENST00000622878 DAZ2Q13117 558 aaKnown RBP11.18□□□□□ -0.62
DDB2-216ENST00000622878 BTN1A1Q13410 526 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 FAM122CQ6P4D5 195 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 SMIM3Q9BZL3 60 aa11.18□□□□□ -0.62
DDB2-216ENST00000622878 PRR9Q5T870 116 aa11.17□□□□□ -0.62
DDB2-216ENST00000622878 ZNF492Q9P255 531 aa11.17□□□□□ -0.62
DDB2-216ENST00000622878 SNURFLB1AK76 121 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 OR7C2O60412 319 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 IFNA5P01569 189 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 HOXA5P20719 270 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
DDB2-216ENST00000622878 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 TMEM78Q5T7P6 136 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
DDB2-216ENST00000622878 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GAGE12BA1L429 117 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GAGE7O76087 117 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 NUDT3O95989 172 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 PTTG1O95997 202 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GPX1P07203 203 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 RANP62826 216 aaKnown RBP11.15□□□□□ -0.62
DDB2-216ENST00000622878 Q6ZQT7 251 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 Q6ZTI0 123 aa11.15□□□□□ -0.62
DDB2-216ENST00000622878 EIF4E3Q8N5X7 224 aaKnown RBP11.15□□□□□ -0.62
DDB2-216ENST00000622878 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 ZNF138P52744 262 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 UBE2L3P68036 154 aaKnown RBP11.14□□□□□ -0.63
DDB2-216ENST00000622878 KHDC3LQ587J8 217 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 ZNF680Q8NEM1 530 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 ZNRF2Q8NHG8 242 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 Q9H3A6 140 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 GSN-AS1Q9NRJ2 163 aa11.14□□□□□ -0.63
DDB2-216ENST00000622878 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 EIF3GO75821 320 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDB2-216ENST00000622878 M6PRP20645 277 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 Q8TAT8 98 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 ATG101Q9BSB4 218 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 LINC00588Q9Y4M8 146 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 MUC4Q99102 2169 aa11.13□□□□□ -0.63
DDB2-216ENST00000622878 H3BNG1 76 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 SPINK4O60575 86 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 TAS2R45P59539 299 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 OR5I1Q13606 314 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 RXFP4Q8TDU9 374 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 TMPRSS5Q9H3S3 457 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 TP53TG3Q9ULZ0 132 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 KLF12Q9Y4X4 402 aa11.12□□□□□ -0.63
DDB2-216ENST00000622878 DIRC3C9JPN6 131 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 CSN1S1P47710 185 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 CCL18P55774 89 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 TCL1AP56279 114 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 RAB2AP61019 212 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 ZNF266Q14584 549 aa11.11□□□□□ -0.63
DDB2-216ENST00000622878 IBA57Q5T440 356 aaKnown RBP11.11□□□□□ -0.63
DDB2-216ENST00000622878 GNPNAT1Q96EK6 184 aaPredicted RBP11.11□□□□□ -0.63
DDB2-216ENST00000622878 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
DDB2-216ENST00000622878 ACOT6Q3I5F7 207 aaPredicted RBP11.1□□□□□ -0.63
DDB2-216ENST00000622878 Q5BKY6 102 aa11.1□□□□□ -0.63
DDB2-216ENST00000622878 VSIG2Q96IQ7 327 aa11.1□□□□□ -0.63
DDB2-216ENST00000622878 AQP10Q96PS8 301 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms