RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 STPG4Q8N801 248 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 C8orf31Q8N9H6 132 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 IGF2BP2-AS1Q96M15 143 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 RUSC1-AS1Q66K80 236 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 TMEM75Q8N9X5 138 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 Q8NA96 180 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 MOB4Q9Y3A3 225 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 KIR2DL5BA0A0G2JN68 375 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 KIR2DL5BA0A0G2JPC4 375 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
MSH6-215ENST00000622629 LTAP01374 205 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 GP9P14770 177 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 KIR2DL5AQ8N109 375 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
MSH6-215ENST00000622629 IGLV1-47P01700 117 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 NPSP0C0P6 89 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 PSMB2P49721 201 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 PLP1P60201 277 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 NPFFR1Q9GZQ6 430 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 K7EIM0 57 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 PRB1P04280 392 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 AMMECR1LQ6DCA0 310 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 PRR25Q96S07 402 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 MS4A6AQ9H2W1 248 aa10.15□□□□□ -0.78
MSH6-215ENST00000622629 SETD2Q9BYW2 2564 aaPredicted RBP10.15□□□□□ -0.78
MSH6-215ENST00000622629 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.79
MSH6-215ENST00000622629 SNRPD3P62318 126 aaKnown RBP10.15□□□□□ -0.79
MSH6-215ENST00000622629 ZNF48Q96MX3 618 aaPredicted RBP10.15□□□□□ -0.79
MSH6-215ENST00000622629 USP9XQ93008 2570 aaPredicted RBP10.14□□□□□ -0.79
MSH6-215ENST00000622629 SMIM13P0DJ93 91 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 VGLL1Q99990 258 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 NAV2Q8IVL1 2488 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 IGKV1D-37A0A075B6S9 117 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 TRAV21A0A0B4J279 112 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 I3L2K1 104 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 COX6B1P14854 86 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 TMEM170BQ5T4T1 132 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 ZNF256Q9Y2P7 627 aaPredicted RBP10.14□□□□□ -0.79
MSH6-215ENST00000622629 H7C2G1 150 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 CD7P09564 240 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 GTSCR1Q86UQ5 136 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 SYT8Q8NBV8 401 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 JKAMPQ9P055 326 aa10.14□□□□□ -0.79
MSH6-215ENST00000622629 LDLRAD2Q5SZI1 272 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 SAMD13Q5VXD3 122 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 Q8N7P7 452 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 NHP2Q9NX24 153 aaKnown RBP10.13□□□□□ -0.79
MSH6-215ENST00000622629 UBE2E1P51965 193 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 PRSS57Q6UWY2 283 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 Q6ZVH6 145 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 HAX1O00165 279 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 LINC00173Q6ZV60 143 aa10.13□□□□□ -0.79
MSH6-215ENST00000622629 SONP18583 2426 aaKnown RBP10.13□□□□□ -0.79
MSH6-215ENST00000622629 DPM2O94777 84 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 IL17RELQ6ZVW7 336 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 ORAOV1Q8WV07 137 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 GTSF1Q8WW33 167 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 MRPS16Q9Y3D3 137 aaKnown RBP10.12□□□□□ -0.79
MSH6-215ENST00000622629 TEX22C9J3V5 150 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 TMEM158Q8WZ71 300 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 IGLV2-8P01709 118 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 SRSF1Q07955 248 aaKnown RBP eCLIP10.12□□□□□ -0.796e-6■■■■□ 21.2
MSH6-215ENST00000622629 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
MSH6-215ENST00000622629 LINC00574Q9H8X3 128 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 WDFY4Q6ZS81 3184 aa10.12□□□□□ -0.79
MSH6-215ENST00000622629 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 PRSS2P07478 247 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 MRPL51Q4U2R6 128 aaKnown RBP10.11□□□□□ -0.79
MSH6-215ENST00000622629 REV3LO60673 3130 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 COL4A2P08572 1712 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 SFTA2Q6UW10 78 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 FAM110DQ8TAY7 271 aaPredicted RBP10.11□□□□□ -0.79
MSH6-215ENST00000622629 IGKCP01834 107 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 RIPPLY3P57055 190 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 C14orf178Q8N769 122 aaPredicted RBP10.11□□□□□ -0.79
MSH6-215ENST00000622629 HIVEP3Q5T1R4 2406 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
MSH6-215ENST00000622629 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 JMJD8Q96S16 334 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 SIGLEC8Q9NYZ4 499 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 IGHV2-70DA0A0C4DH43 119 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 A6NJY4 79 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 INS-IGF2F8WCM5 200 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 LINC00322Q6ZN03 302 aaPredicted RBP10.1□□□□□ -0.79
MSH6-215ENST00000622629 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 MRPL52Q86TS9 123 aaKnown RBP10.1□□□□□ -0.79
MSH6-215ENST00000622629 NACAE9PAV3 2078 aa10.1□□□□□ -0.79
MSH6-215ENST00000622629 SPTBN5Q9NRC6 3674 aaKnown RBP10.1□□□□□ -0.79
MSH6-215ENST00000622629 OVOL3O00110 214 aa10.09□□□□□ -0.79
MSH6-215ENST00000622629 NPYP01303 97 aa10.09□□□□□ -0.79
MSH6-215ENST00000622629 OR11H6Q8NGC7 330 aa10.09□□□□□ -0.79
MSH6-215ENST00000622629 C1orf159Q96HA4 380 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms