RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GAGE1Q13065 139 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 FER1L6-AS1Q8NA97 138 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 CFAP46Q8IYW2 2715 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 TMSB15BA0A087X1C1 80 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 PRAC2D3DTV9 90 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 D6R8Y8 96 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 LINC01545Q5VT33 79 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 ORMDL3Q8N138 153 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 ZNF747Q9BV97 191 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 PPP1R14DQ9NXH3 145 aa7.26□□□□□ -1.25
PDPN-212ENST00000621990 A0A096LNJ9 63 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 TRAV41A0A0B4J266 112 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 FABP5P3A8MUU1 101 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 NDUFS8O00217 210 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 IGF1P05019 195 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 ATP5G2Q06055 141 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
PDPN-212ENST00000621990 C10orf105Q8TEF2 133 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 METTL26Q96S19 204 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 PIMREGQ9BSJ6 248 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 TMEM191AQ9H0A3 160 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 HIF1ANQ9NWT6 349 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 COL12A1Q99715 3063 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 IGHV4-61A0A0C4DH41 118 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 CSN3P07498 182 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 FA2HQ7L5A8 372 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 OR10AG1Q8NH19 301 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 PRSS3P2Q8NHM4 247 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 TMEM208Q9BTX3 173 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 NPFFR1Q9GZQ6 430 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 SIGLEC8Q9NYZ4 499 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 PKD1L2Q7Z442 2459 aa7.25□□□□□ -1.25
PDPN-212ENST00000621990 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 IFI27P40305 119 aaPredicted RBP7.24□□□□□ -1.25
PDPN-212ENST00000621990 ERCC8Q13216 396 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 TMEM219Q86XT9 240 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 RNF182Q8N6D2 247 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
PDPN-212ENST00000621990 C8orf86Q6ZUL3 223 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 STPG4Q8N801 248 aa7.24□□□□□ -1.25
PDPN-212ENST00000621990 CACNA1AO00555 2505 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 TWIST1Q15672 202 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 BATFQ16520 125 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 FAM106AQ4KMX7 169 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 C9orf47Q6ZRZ4 202 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 IL17RELQ6ZVW7 336 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 GLMPQ8WWB7 406 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 AGPAT4-IT1Q9H0P7 198 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 MS4A6AQ9H2W1 248 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 H3BUA1 57 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 DLEU1O43261 78 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 HIST1H1AQ02539 215 aaPredicted RBP7.23□□□□□ -1.25
PDPN-212ENST00000621990 RNF185Q96GF1 192 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 CCL19Q99731 98 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 SCRT2Q9NQ03 307 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 CELSR2Q9HCU4 2923 aa7.23□□□□□ -1.25
PDPN-212ENST00000621990 TRAV40A0A0B4J280 105 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 IGHV3-66A0A0C4DH42 116 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 hDV102S1A0JD36 115 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 ORM1P02763 201 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 PPBPP02775 128 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 LOXL1Q08397 574 aaPredicted RBP7.22□□□□□ -1.25
PDPN-212ENST00000621990 AKAP6Q13023 2319 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 IGKV3D-20A0A0C4DH25 116 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 G0S2P27469 103 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 PPIFP30405 207 aaKnown RBP7.22□□□□□ -1.25
PDPN-212ENST00000621990 BRD3OSQ6XYD6 125 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 CACNA1BQ00975 2339 aa7.22□□□□□ -1.25
PDPN-212ENST00000621990 IGHV3OR16-10A0A075B7F0 116 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 MUC21A0A0G2JKD1 596 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 MUC21A0A140T8X8 626 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 A6NDX4 124 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 NPYP01303 97 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 IGHG2P01859 326 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 TRGV3P03979 118 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 CKS2P33552 79 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 MUC21Q5SSG8 566 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 MSRB1Q9NZV6 116 aa7.21□□□□□ -1.25
PDPN-212ENST00000621990 HSBP1L1C9JCN9 74 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 NDUFA4O00483 81 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 IGHV4-38-2P0DP08 117 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 TFPI2P48307 235 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 DPF1Q92782 380 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 USMG5Q96IX5 58 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 C11orf21Q9P2W6 132 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 LENEPQ9Y5L5 61 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 IGHV3OR16-13A0A075B7E8 117 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 IGHV3-74A0A0B4J1X5 117 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 TCF21O43680 179 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 NCR2O95944 276 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 ARL3P36405 182 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 CLEC2AQ6UVW9 174 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 C9orf139Q6ZV77 190 aa7.21□□□□□ -1.26
PDPN-212ENST00000621990 PIEZO1Q92508 2521 aa7.2□□□□□ -1.26
PDPN-212ENST00000621990 IGHV4-4A0A075B6R2 117 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms