RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 SAMD10Q9BYL1 202 aa16.44■□□□□ 0.22
LIME1-210ENST00000621325 TRBV7-1A0A0A6YYK4 115 aa16.44■□□□□ 0.22
LIME1-210ENST00000621325 ZNF207O43670 478 aaKnown RBP16.44■□□□□ 0.22
LIME1-210ENST00000621325 HLA-DQA1P01909 254 aa16.44■□□□□ 0.22
LIME1-210ENST00000621325 CRIP2P52943 208 aaPredicted RBP16.44■□□□□ 0.22
LIME1-210ENST00000621325 CLEC5AQ9NY25 188 aa16.44■□□□□ 0.22
LIME1-210ENST00000621325 IGKV2-40A0A087WW87 121 aaPredicted RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 IGHV3-49A0A0A0MS15 119 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 K7EQM0 130 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 BUB3O43684 328 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 IGKV2D-40P01614 121 aaPredicted RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 APOHP02749 345 aaPredicted RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 TRGV3P03979 118 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 CAMPP49913 170 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 COX19Q49B96 90 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 WIPF2Q8TF74 440 aaPredicted RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 NPIPB6E9PJ23 425 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 IGHG4P01861 327 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 RPS20P60866 119 aaKnown RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 PSG9Q00887 426 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 NIT1Q86X76 327 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 C8orf49Q96NF6 230 aa16.43■□□□□ 0.22
LIME1-210ENST00000621325 SSBP4Q9BWG4 385 aaPredicted RBP16.43■□□□□ 0.22
LIME1-210ENST00000621325 A8MWL6 223 aa16.42■□□□□ 0.22
LIME1-210ENST00000621325 APCSP02743 223 aa16.42■□□□□ 0.22
LIME1-210ENST00000621325 CRIP1P50238 77 aa16.42■□□□□ 0.22
LIME1-210ENST00000621325 BAGE3Q86Y29 109 aa16.42■□□□□ 0.22
LIME1-210ENST00000621325 PGLYRP4Q96LB8 373 aa16.42■□□□□ 0.22
LIME1-210ENST00000621325 IGF1P05019 195 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 SRIP30626 198 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 CT83Q5H943 113 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 MRPS16Q9Y3D3 137 aaKnown RBP16.41■□□□□ 0.22
LIME1-210ENST00000621325 IGHG2P01859 326 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 ATOH7Q8N100 152 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 LINC01356Q8N9X3 169 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 NAV2Q8IVL1 2488 aa16.41■□□□□ 0.22
LIME1-210ENST00000621325 GAGE12BA1L429 117 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 CSN1S1P47710 185 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 Q0VG73 95 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 TMEM190Q8WZ59 177 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 A0A1B0GXF2 115 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 TRBV12-3P01733 135 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 AMMECR1LQ6DCA0 310 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 RASL11AQ6T310 242 aa16.4■□□□□ 0.22
LIME1-210ENST00000621325 FAM223BA6NKX1 122 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 CHEK1O14757 476 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 ESDP10768 282 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 PPIFP30405 207 aaKnown RBP16.39■□□□□ 0.21
LIME1-210ENST00000621325 FAM223AQ8IWN6 122 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 KLK15Q9H2R5 256 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 GATA3P23771 443 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 LCNL1Q6ZST4 164 aa16.39■□□□□ 0.21
LIME1-210ENST00000621325 RNF223E7ERA6 249 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 TGFAP01135 160 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 RCHY1Q96PM5 261 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 TAX1BP3O14907 124 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 SIGLECL1Q8N7X8 197 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 VGLL1Q99990 258 aa16.38■□□□□ 0.21
LIME1-210ENST00000621325 DEFB112Q30KQ8 113 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 Q8TAT8 98 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 RBPMS2Q6ZRY4 209 aaKnown RBP16.37■□□□□ 0.21
LIME1-210ENST00000621325 ATP5L2Q7Z4Y8 100 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 RNF182Q8N6D2 247 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 GFRA4Q9GZZ7 299 aa16.37■□□□□ 0.21
LIME1-210ENST00000621325 ZNF253O75346 499 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 IGHV3-11P01762 117 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 IGHV4-59P01825 116 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 METTL26Q96S19 204 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 TP73-AS1Q9UF72 201 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 HBBP68871 147 aa16.36■□□□□ 0.21
LIME1-210ENST00000621325 PRAC2D3DTV9 90 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 ARL3P36405 182 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 TMEM95Q3KNT9 176 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 SAMD13Q5VXD3 122 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 LCN12Q6JVE5 192 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 GPX1P07203 203 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 PF4V1P10720 104 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 OR10J3Q5JRS4 329 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 KLHDC1Q8N7A1 406 aa16.35■□□□□ 0.21
LIME1-210ENST00000621325 A0A087X0K7 114 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 RAB9AP51151 201 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 UNQ9165/PRO28630Q6UXU0 137 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 NRN1Q9NPD7 142 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 SERTM2A0A1B0GWG4 89 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 U3KQE9 123 aa16.34■□□□□ 0.21
LIME1-210ENST00000621325 FAM231BA6NCW3 169 aa16.33■□□□□ 0.2
LIME1-210ENST00000621325 C18orf32Q8TCD1 76 aa16.33■□□□□ 0.2
LIME1-210ENST00000621325 PRR25Q96S07 402 aa16.33■□□□□ 0.2
LIME1-210ENST00000621325 CT45A10P0DMU9 189 aa16.33■□□□□ 0.2
LIME1-210ENST00000621325 OR1N2Q8NGR9 330 aa16.33■□□□□ 0.2
LIME1-210ENST00000621325 ERCC8Q13216 396 aa16.32■□□□□ 0.2
LIME1-210ENST00000621325 ATP6V0BQ99437 205 aa16.31■□□□□ 0.2
LIME1-210ENST00000621325 SELENOKQ9Y6D0 94 aa16.31■□□□□ 0.2
LIME1-210ENST00000621325 TMSB15BA0A087X1C1 80 aa16.31■□□□□ 0.2
LIME1-210ENST00000621325 G3V4G9 280 aa16.31■□□□□ 0.2
LIME1-210ENST00000621325 SH2D1AO60880 128 aa16.31■□□□□ 0.2
LIME1-210ENST00000621325 ZNF80P51504 273 aaPredicted RBP16.31■□□□□ 0.2
LIME1-210ENST00000621325 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
LIME1-210ENST00000621325 CREBBPQ92793 2442 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms