RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 OR5C1Q8NGR4 320 aa15.32■□□□□ 0.04
SRRT-218ENST00000620394 RXFP4Q8TDU9 374 aa15.32■□□□□ 0.04
SRRT-218ENST00000620394 FAM167A-AS1Q96KT0 104 aa15.32■□□□□ 0.04
SRRT-218ENST00000620394 SLC25A2Q9BXI2 301 aa15.32■□□□□ 0.04
SRRT-218ENST00000620394 E5RGE8 158 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 H3BNG1 76 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 HOXA5P20719 270 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 C11orf72Q8NBR9 251 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 THAP6Q8TBB0 222 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 LINC00477Q96M19 166 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 C18orf15Q96N68 181 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 SLC25A31Q9H0C2 315 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 TIMM9Q9Y5J7 89 aa15.31■□□□□ 0.04
SRRT-218ENST00000620394 TRAV26-1A0A087WT03 109 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GAGE12BA1L429 117 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 PRAF2O60831 178 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GAGE7O76087 117 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 SIX6O95475 246 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GAGE12FP0CL80 117 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GAGE12GP0CL81 117 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GAGE12IP0CL82 117 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 CRISP2P16562 243 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 ERCC8Q13216 396 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 C9orf47Q6ZRZ4 202 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 SSX7Q7RTT5 188 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 ZNF680Q8NEM1 530 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 GNPNAT1Q96EK6 184 aaPredicted RBP15.3■□□□□ 0.04
SRRT-218ENST00000620394 AGPAT4-IT1Q9H0P7 198 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 KCNIP2Q9NS61 270 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 OR5AC2Q9NZP5 309 aa15.3■□□□□ 0.04
SRRT-218ENST00000620394 H0YIZ8 118 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 ZNF324O75467 553 aaPredicted RBP15.29■□□□□ 0.04
SRRT-218ENST00000620394 OR5I1Q13606 314 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 CLINT1Q14677 625 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 MIR17HGQ75NE6 70 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 EXOC3-AS1Q8N2X6 119 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 BLNKQ8WV28 456 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 AAMDCQ9H7C9 122 aa15.29■□□□□ 0.04
SRRT-218ENST00000620394 NMBP08949 121 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 IFITM3Q01628 133 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 CD300CQ08708 224 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 BTN1A1Q13410 526 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 ANXA2RQ3ZCQ2 193 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 Q6ZTI0 123 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 SPATA12Q7Z6I5 190 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 UPK3BQ9BT76 320 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 MRPL32Q9BYC8 188 aaKnown RBP15.28■□□□□ 0.04
SRRT-218ENST00000620394 WDR61Q9GZS3 305 aaKnown RBP15.28■□□□□ 0.04
SRRT-218ENST00000620394 TMPRSS5Q9H3S3 457 aa15.28■□□□□ 0.04
SRRT-218ENST00000620394 APOBP04114 4563 aaKnown RBP15.27■□□□□ 0.04
SRRT-218ENST00000620394 ICAM4Q14773 271 aa15.27■□□□□ 0.04
SRRT-218ENST00000620394 LRRC37A5PQ49AS3 106 aa15.27■□□□□ 0.04
SRRT-218ENST00000620394 ZFAND2AQ8N6M9 145 aa15.27■□□□□ 0.04
SRRT-218ENST00000620394 IGKV2-40A0A087WW87 121 aaPredicted RBP15.26■□□□□ 0.03
SRRT-218ENST00000620394 IGKV2D-40P01614 121 aaPredicted RBP15.26■□□□□ 0.03
SRRT-218ENST00000620394 NBEAP1P0C6P0 100 aa15.26■□□□□ 0.03
SRRT-218ENST00000620394 CYCSP99999 105 aaKnown RBP15.26■□□□□ 0.03
SRRT-218ENST00000620394 EIF4E3Q8N5X7 224 aaKnown RBP15.26■□□□□ 0.03
SRRT-218ENST00000620394 FXYD5Q96DB9 178 aa15.26■□□□□ 0.03
SRRT-218ENST00000620394 GSN-AS1Q9NRJ2 163 aa15.26■□□□□ 0.03
SRRT-218ENST00000620394 TCL1AP56279 114 aa15.25■□□□□ 0.03
SRRT-218ENST00000620394 H2BFSP57053 126 aa15.25■□□□□ 0.03
SRRT-218ENST00000620394 PRR9Q5T870 116 aa15.25■□□□□ 0.03
SRRT-218ENST00000620394 OR51M1Q9H341 326 aa15.25■□□□□ 0.03
SRRT-218ENST00000620394 TRBV7-9A0A0J9YWB2 115 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 A0A0J9YY99 117 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 INMT-MINDY4F8WBC2 141 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 IBA57Q5T440 356 aaKnown RBP15.24■□□□□ 0.03
SRRT-218ENST00000620394 TMEM78Q5T7P6 136 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 FAM122CQ6P4D5 195 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 VGLL1Q99990 258 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 MARVELD1Q9BSK0 173 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 Q9H8V8 135 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 PTTG2Q9NZH5 202 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 ZNF492Q9P255 531 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 FUT9Q9Y231 359 aa15.24■□□□□ 0.03
SRRT-218ENST00000620394 GPX1P07203 203 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 RNASE4P34096 147 aaKnown RBP15.23■□□□□ 0.03
SRRT-218ENST00000620394 TTC32Q5I0X7 151 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 PPP1R1CQ8WVI7 109 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 PHYHIPLQ96FC7 376 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 ATP5SQ99766 215 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 PAXXQ9BUH6 204 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 KRTAP1-5Q9BYS1 174 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 Q9H3A6 140 aa15.23■□□□□ 0.03
SRRT-218ENST00000620394 MRPS16Q9Y3D3 137 aaKnown RBP15.23■□□□□ 0.03
SRRT-218ENST00000620394 DNAH5Q8TE73 4624 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 A6NHS1 94 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 C17orf112F2Z3M2 114 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 SPINK4O60575 86 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 ESRGQ1W209 222 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 VSIG2Q96IQ7 327 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 HERC1Q15751 4861 aa15.22■□□□□ 0.03
SRRT-218ENST00000620394 TRGV2A0A075B6R0 118 aa15.21■□□□□ 0.03
SRRT-218ENST00000620394 OR10J4P0C629 311 aa15.21■□□□□ 0.03
SRRT-218ENST00000620394 KLF12Q9Y4X4 402 aa15.21■□□□□ 0.03
SRRT-218ENST00000620394 HSPB11Q9Y547 144 aa15.21■□□□□ 0.03
SRRT-218ENST00000620394 TRGV1A0A0A0MS02 117 aa15.2■□□□□ 0.02
SRRT-218ENST00000620394 A0A1W2PPQ1 181 aa15.2■□□□□ 0.02
SRRT-218ENST00000620394 RBAKDNA6NC62 111 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms