RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 IL4P05112 153 aa11.48□□□□□ -0.57
SYNRG-225ENST00000619541 DKK4Q9UBT3 224 aa11.48□□□□□ -0.57
SYNRG-225ENST00000619541 HHLA3Q9XRX5 114 aa11.48□□□□□ -0.57
SYNRG-225ENST00000619541 NCBP2LA6PVI3 153 aaKnown RBP11.47□□□□□ -0.57
SYNRG-225ENST00000619541 CNIH1O95406 144 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 IGHV3OR16-8A0A075B7F1 116 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 MYOZ3Q8TDC0 251 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 HIGD1BQ9P298 99 aa11.47□□□□□ -0.57
SYNRG-225ENST00000619541 TRBV19A0A075B6N1 114 aa11.46□□□□□ -0.57
SYNRG-225ENST00000619541 FOXI1Q12951 378 aa11.46□□□□□ -0.57
SYNRG-225ENST00000619541 SEM1Q6ZVN7 128 aa11.46□□□□□ -0.57
SYNRG-225ENST00000619541 UFC1Q9Y3C8 167 aa11.46□□□□□ -0.57
SYNRG-225ENST00000619541 B5MCH6 92 aa11.46□□□□□ -0.58
SYNRG-225ENST00000619541 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.58
SYNRG-225ENST00000619541 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.58
SYNRG-225ENST00000619541 TM2D2Q9BX73 214 aa11.46□□□□□ -0.58
SYNRG-225ENST00000619541 HOXA3O43365 443 aaPredicted RBP11.45□□□□□ -0.58
SYNRG-225ENST00000619541 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
SYNRG-225ENST00000619541 TNFRSF6BO95407 300 aa11.45□□□□□ -0.58
SYNRG-225ENST00000619541 PROCRQ9UNN8 238 aa11.45□□□□□ -0.58
SYNRG-225ENST00000619541 OVOL3O00110 214 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 EGR2P11161 476 aaPredicted RBP11.44□□□□□ -0.58
SYNRG-225ENST00000619541 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 FBXL15Q9H469 300 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 EFNA4P52798 201 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 XGP55808 180 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 CCL17Q92583 94 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 PRSS29PA6NIE9 313 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
SYNRG-225ENST00000619541 LINC01549A6NIU2 74 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 OR11H12B2RN74 326 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 LHBP01229 141 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 OR11H1Q8NG94 326 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 OR11H2Q8NH07 326 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 LINC00312Q9Y6C7 94 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 TMEM200BQ69YZ2 307 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
SYNRG-225ENST00000619541 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 C1QTNF4Q9BXJ3 329 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 Q6ZUT4 128 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 ATP5LO75964 103 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 IGHV1-46P01743 117 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 Q6ZS92 163 aa11.42□□□□□ -0.58
SYNRG-225ENST00000619541 FAM90A27PA6NNH2 459 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 ZFP2Q6ZN57 461 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 VKORC1Q9BQB6 163 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 U3KQK5 164 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 CRYGCP07315 174 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 IGFL3Q6UXB1 125 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
SYNRG-225ENST00000619541 CDIP1Q9H305 208 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 NXT2Q9NPJ8 142 aaKnown RBP11.41□□□□□ -0.58
SYNRG-225ENST00000619541 ADGRG4Q8IZF6 3080 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 SMG1Q96Q15 3661 aaKnown RBP11.41□□□□□ -0.58
SYNRG-225ENST00000619541 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 RNF125Q96EQ8 232 aa11.41□□□□□ -0.58
SYNRG-225ENST00000619541 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
SYNRG-225ENST00000619541 MED13LQ71F56 2210 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 HLA-DRB4P13762 266 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 ARL3P36405 182 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 FAM215AQ9Y5M1 114 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 HLA-DRB4X5D2U9 266 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 LINC01548A6NM66 108 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 COX7A1P24310 79 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 FOXC1Q12948 553 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
SYNRG-225ENST00000619541 IGKV1-17P01599 117 aa11.4□□□□□ -0.59
SYNRG-225ENST00000619541 PRTN3P24158 256 aa11.4□□□□□ -0.59
SYNRG-225ENST00000619541 ZNF80P51504 273 aaPredicted RBP11.4□□□□□ -0.59
SYNRG-225ENST00000619541 TEX29Q8N6K0 151 aa11.4□□□□□ -0.59
SYNRG-225ENST00000619541 PRO0461Q9UI25 63 aa11.4□□□□□ -0.59
SYNRG-225ENST00000619541 MALRD1Q5VYJ5 2156 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
SYNRG-225ENST00000619541 TMEM14CQ9P0S9 112 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 TRBV20-1A0A075B6N2 111 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 GLRXP35754 106 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 KLRD1Q13241 179 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 IGF2RP11717 2491 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 KALRNO60229 2985 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 NDUFB3O43676 98 aa11.39□□□□□ -0.59
SYNRG-225ENST00000619541 H7C2G1 150 aa11.38□□□□□ -0.59
SYNRG-225ENST00000619541 ZNF474Q6S9Z5 364 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-225ENST00000619541 MBD3L4A6NDZ8 208 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-225ENST00000619541 MBD3L3A6NE82 208 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-225ENST00000619541 MBD3L5A6NJ08 208 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-225ENST00000619541 PAX8Q06710 450 aa11.38□□□□□ -0.59
SYNRG-225ENST00000619541 ZFAND6Q6FIF0 208 aa11.38□□□□□ -0.59
SYNRG-225ENST00000619541 MBD3L2Q8NHZ7 208 aaPredicted RBP11.38□□□□□ -0.59
SYNRG-225ENST00000619541 IGFBPL1Q8WX77 278 aa11.38□□□□□ -0.59
SYNRG-225ENST00000619541 SLC25A15Q9Y619 301 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms