RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 Q8N9W7 124 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 SIRPDQ9H106 197 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 C21orf62Q9NYP8 219 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 MSRB1Q9NZV6 116 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 TIMM8BQ9Y5J9 83 aaPredicted RBP3.34□□□□□ -1.87
SEC22B-202ENST00000618538 COX11Q9Y6N1 276 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 U3KQK5 164 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 CRYBG3Q68DQ2 2970 aa3.34□□□□□ -1.87
SEC22B-202ENST00000618538 SPTAN1Q13813 2472 aaKnown RBP3.34□□□□□ -1.87
SEC22B-202ENST00000618538 C20orf202A1L168 122 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 CLPSL1A2RUU4 121 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 NCBP2LA6PVI3 153 aaKnown RBP3.34□□□□□ -1.88
SEC22B-202ENST00000618538 IGLC6P0CF74 106 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 FGF6P10767 208 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 PDE6HQ13956 83 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.88
SEC22B-202ENST00000618538 ANKRD39Q53RE8 183 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 BVES-AS1Q5T3Y7 98 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 RNF182Q8N6D2 247 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.88
SEC22B-202ENST00000618538 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 CCDC140Q96MF4 163 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 PRR25Q96S07 402 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 RAB1BQ9H0U4 201 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 ST20Q9HBF5 79 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 C11orf21Q9P2W6 132 aa3.34□□□□□ -1.88
SEC22B-202ENST00000618538 A0A087X0K7 114 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 TAX1BP3O14907 124 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 SNAI2O43623 268 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 NPYP01303 97 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 MFAP4P55083 255 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 ERCC8Q13216 396 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 RIGQ13278 110 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 FAM104BQ5XKR9 115 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 PET117Q6UWS5 81 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 RNF185Q96GF1 192 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 AP5S1Q9NUS5 200 aa3.33□□□□□ -1.88
SEC22B-202ENST00000618538 PKD1L2Q7Z442 2459 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 IGHV3OR16-13A0A075B7E8 117 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 IGHV3-74A0A0B4J1X5 117 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TRAV8-2A0A0B4J237 113 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 IGHV3-66A0A0C4DH42 116 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TMEM189A5PLL7 270 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 G3V318 75 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 ATP6V0E1O15342 81 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 NUDT3O95989 172 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 OR5AL1P0C617 328 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 GPR183P32249 361 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 CEACAM3P40198 252 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 PTTG1IPP53801 180 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TCTAP57738 103 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 RHOGP84095 191 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 RELQ04864 619 aaPredicted RBP3.32□□□□□ -1.88
SEC22B-202ENST00000618538 FAM162BQ5T6X4 162 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 LCNL1Q6ZST4 164 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 DTX2Q86UW9 622 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 ZNF502Q8TBZ5 544 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 CLUHP3Q96NS8 147 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 MAP1LC3CQ9BXW4 147 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 USP9XQ93008 2570 aaPredicted RBP3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 IGHV2-70DA0A0C4DH43 119 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 GATA1P15976 413 aaPredicted RBP3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TMEM11P17152 192 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 PPIFP30405 207 aaKnown RBP3.32□□□□□ -1.88
SEC22B-202ENST00000618538 SAA4P35542 130 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 ECSCRQ19T08 205 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 KLK9Q2XQG4 91 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 Q6AWC8 147 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 SLC25A34Q6PIV7 304 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 IL17RELQ6ZVW7 336 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TIMD4Q96H15 378 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 PRELID3AQ96N28 172 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 TMEM191AQ9H0A3 160 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 AAMDCQ9H7C9 122 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 KLK9Q9UKQ9 250 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 RNF24Q9Y225 148 aa3.32□□□□□ -1.88
SEC22B-202ENST00000618538 CSMD2Q7Z408 3487 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 IGHV3-49A0A0A0MS15 119 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 IGKV3D-20A0A0C4DH25 116 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 A0A1B0GW15 77 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 SERTM2A0A1B0GWG4 89 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 K7EQM0 130 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 BUB3O43684 328 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 TRGV3P03979 118 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 CT45A10P0DMU9 189 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 COX8AP10176 69 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 RPL7P18124 248 aaKnown RBP3.31□□□□□ -1.88
SEC22B-202ENST00000618538 LMO4P61968 165 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 RBX1P62877 108 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 CACNG7P62955 275 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 UBE2V1Q13404 147 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 PRSS57Q6UWY2 283 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 C1orf122Q6ZSJ8 110 aa3.31□□□□□ -1.88
SEC22B-202ENST00000618538 FA2HQ7L5A8 372 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms