RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 EVI2AP22794 236 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 C9orf66Q5T8R8 295 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 HAPLN4Q86UW8 402 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 MRAP2Q96G30 205 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 IGHV3-73A0A0B4J1V6 119 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 A0A1B0GV72 72 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 PFN1P07737 140 aaKnown RBP7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 LINC00614P0C842 121 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 CDKN1BP46527 198 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 FNDC4Q9H6D8 234 aaPredicted RBP7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 ZNF492Q9P255 531 aa7.44□□□□□ -1.22
CLTCL1-208ENST00000615606 TMEM89A2RUT3 159 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 UBE2CO00762 179 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 TNFRSF13BO14836 293 aaPredicted RBP7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 ZNF876PQ49A33 203 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 HIVEP2P31629 2446 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 IGFBPL1Q8WX77 278 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 LAMTOR2Q9Y2Q5 125 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 IGHV1OR15-1A0A075B7D0 117 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 FAM90A2PQ658T7 463 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 GFRA4Q9GZZ7 299 aa7.43□□□□□ -1.22
CLTCL1-208ENST00000615606 VCYO14598 125 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 RIPPLY3P57055 190 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 DAD1P61803 113 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR20EP86478 221 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR20CP86479 221 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR20DP86480 221 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR20BP86481 221 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR20AP86496 221 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 C14orf178Q8N769 122 aaPredicted RBP7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 LRP4O75096 1905 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 COLCA2A8K830 154 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 NUP35Q8NFH5 326 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 NCKAP5O14513 1909 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 CLPSL1A2RUU4 121 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 NDUFA3O95167 84 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 DNAL4O96015 105 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 IL15RAQ13261 267 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 KNCNA6PVL3 124 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 LAGE3Q14657 143 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 C11orf71Q6IPW1 123 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 FOXI2Q6ZQN5 318 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 OR13C6PQ8NH95 151 aa7.42□□□□□ -1.22
CLTCL1-208ENST00000615606 D6R8Y8 96 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 IGHG2P01859 326 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 CXCL1P09341 107 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 IGHV4-31P0DP07 118 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 DEFB136Q30KP8 78 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 RITA1Q96K30 269 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 HIST1H2BLQ99880 126 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 A6NDX4 124 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 I3L2K1 104 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 CD5LO43866 347 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 NCR2O95944 276 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 WFDC11Q8NEX6 87 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 MS4A6AQ9H2W1 248 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 FAM231BA6NCW3 169 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 K7EIM0 57 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 PLA2G2AP14555 144 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 ODF3L1Q8IXM7 274 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 PRR25Q96S07 402 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 LINC00574Q9H8X3 128 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 PTPN13Q12923 2485 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 SHANK1Q9Y566 2161 aa7.41□□□□□ -1.22
CLTCL1-208ENST00000615606 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 ZNF124Q15973 351 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 VWC2Q2TAL6 325 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 CT83Q5H943 113 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 TMEM158Q8WZ71 300 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 MRPL53Q96EL3 112 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 AJUBAQ96IF1 538 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 ZMAT4Q9H898 229 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 APOMO95445 188 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 IGLV2-23P01705 113 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 SLURP1P55000 103 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 OR5A1Q8NGJ0 315 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 SPCS1Q9Y6A9 102 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 MED12LQ86YW9 2145 aa7.4□□□□□ -1.22
CLTCL1-208ENST00000615606 TRAV9-2A0A087WT02 112 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 GGTLC3B5MD39 225 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 MYCNOSP40205 109 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 BCL6BQ8N143 479 aaPredicted RBP7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 FXYD5Q96DB9 178 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 KLK9Q9UKQ9 250 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 NCOA6Q14686 2063 aaPredicted RBP7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 A8MWV9 139 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 ODF3BA8MYP8 253 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 CRYGCP07315 174 aa7.4□□□□□ -1.23
CLTCL1-208ENST00000615606 A0A087WWL8 130 aa7.39□□□□□ -1.23
CLTCL1-208ENST00000615606 F5H768 121 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms