RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 CDIP1Q9H305 208 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 ZNF318Q5VUA4 2279 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 TNFRSF13BO14836 293 aaPredicted RBP12.92□□□□□ -0.34
TSKU-205ENST00000612930 PLGLAQ15195 96 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 LINC01559Q495D7 138 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
TSKU-205ENST00000612930 APOMO95445 188 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 TMEM155Q4W5P6 130 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 MRPL16Q9NX20 251 aaKnown RBP12.91□□□□□ -0.34
TSKU-205ENST00000612930 S4R3C0 116 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 TECTAO75443 2155 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 FOXI1Q12951 378 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 Q8N8P6 123 aa12.91□□□□□ -0.34
TSKU-205ENST00000612930 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
TSKU-205ENST00000612930 CD40P25942 277 aa12.9□□□□□ -0.34
TSKU-205ENST00000612930 SMCPP49901 116 aaPredicted RBP12.9□□□□□ -0.34
TSKU-205ENST00000612930 SRSF6Q13247 344 aaKnown RBP12.9□□□□□ -0.34
TSKU-205ENST00000612930 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
TSKU-205ENST00000612930 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
TSKU-205ENST00000612930 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
TSKU-205ENST00000612930 SYT8Q8NBV8 401 aa12.9□□□□□ -0.34
TSKU-205ENST00000612930 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
TSKU-205ENST00000612930 ORM1P02763 201 aa12.89□□□□□ -0.35
TSKU-205ENST00000612930 ASPMQ8IZT6 3477 aa12.89□□□□□ -0.35
TSKU-205ENST00000612930 ZNF883P0CG24 379 aa12.89□□□□□ -0.35
TSKU-205ENST00000612930 CCL17Q92583 94 aa12.89□□□□□ -0.35
TSKU-205ENST00000612930 FHL3Q13643 280 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 DTX2Q86UW9 622 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
TSKU-205ENST00000612930 C1QTNF4Q9BXJ3 329 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 A0A087WX48 190 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 NDUFA3O95167 84 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 FAM27E3Q08E93 113 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 NFE4Q86UQ8 179 aa12.88□□□□□ -0.35
TSKU-205ENST00000612930 IGHG4P01861 327 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 CFAP126Q5VTH2 177 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 IGLV1-47P01700 117 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 MT-ATP8P03928 68 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 SPINK8P0C7L1 97 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 SRSF2Q01130 221 aaKnown RBP12.87□□□□□ -0.35
TSKU-205ENST00000612930 MYOZ3Q8TDC0 251 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 DCHS1Q96JQ0 3298 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 ZZEF1O43149 2961 aa12.87□□□□□ -0.35
TSKU-205ENST00000612930 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 ZNF48Q96MX3 618 aaPredicted RBP12.86□□□□□ -0.35
TSKU-205ENST00000612930 KLRD1Q13241 179 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 GFRALQ6UXV0 394 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 ATP6V0E2Q8NHE4 81 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 RPEQ96AT9 228 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 CYSLTR1Q9Y271 337 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 FAM215AQ9Y5M1 114 aa12.86□□□□□ -0.35
TSKU-205ENST00000612930 NCBP2LA6PVI3 153 aaKnown RBP12.85□□□□□ -0.35
TSKU-205ENST00000612930 LINC01619G3V211 115 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 ADIPOQQ15848 244 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 IGFL2Q6UWQ7 119 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 NUP37Q8NFH4 326 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 KALRNO60229 2985 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
TSKU-205ENST00000612930 CNIH1O95406 144 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 CD59P13987 128 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 EFNA4P52798 201 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 PGPEP1Q9NXJ5 209 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 ROS1P08922 2347 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 TNRC18O15417 2968 aaPredicted RBP12.85□□□□□ -0.35
TSKU-205ENST00000612930 BUB1B-PAK6H3BSN5 160 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 TRGV3P03979 118 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 LAGE3Q14657 143 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
TSKU-205ENST00000612930 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 XGP55808 180 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 Q6ZS92 163 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 NRACQ8N912 160 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 SMAD5-AS1Q9Y6J3 95 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 C1orf210Q8IVY1 113 aa12.84□□□□□ -0.35
TSKU-205ENST00000612930 ZDBF2Q9HCK1 2354 aa12.83□□□□□ -0.35
TSKU-205ENST00000612930 PLNP26678 52 aa12.83□□□□□ -0.36
TSKU-205ENST00000612930 Q6ZUT4 128 aa12.83□□□□□ -0.36
TSKU-205ENST00000612930 SRSF8Q9BRL6 282 aaKnown RBP12.83□□□□□ -0.36
TSKU-205ENST00000612930 TRAV26-2A0A0B4J265 109 aa12.83□□□□□ -0.36
TSKU-205ENST00000612930 ERCC8Q13216 396 aa12.83□□□□□ -0.36
TSKU-205ENST00000612930 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
TSKU-205ENST00000612930 GPR179Q6PRD1 2367 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 F8W735 103 aaPredicted RBP12.82□□□□□ -0.36
TSKU-205ENST00000612930 GATA3P23771 443 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 DLX4Q92988 240 aaPredicted RBP12.82□□□□□ -0.36
TSKU-205ENST00000612930 RAB1BQ9H0U4 201 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 TSPAN13O95857 204 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
TSKU-205ENST00000612930 CFHR4Q92496 578 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 PTH2Q96A98 100 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
TSKU-205ENST00000612930 ZGRF1Q86YA3 2104 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 LINC01548A6NM66 108 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
TSKU-205ENST00000612930 RPL7P18124 248 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms