RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130		A0A1W2PRD5	423 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130		A0A1W2PRF3	423 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130		A0A1W2PRM7	423 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	TMEM8B	A6NDV4	472 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	IGLL5	B9A064	214 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130		E7EQL1	145 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	GAS8-AS1	O95177	125 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	IGHG4	P01861	327 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	SIGMAR1	Q99720	223 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	PRSS47	A8MTI9	375 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	ZNF207	O43670	478 aa	Known RBP	10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	TMEM11	P17152	192 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	DEFB124	Q8NES8	71 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	SMAD5-AS1	Q9Y6J3	95 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	WDFY4	Q6ZS81	3184 aa		10.67	□□□□□ -0.7
UBE2F-223	ENST00000612130	SPAAR	A0A1B0GVQ0	90 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	PRRG2	O14669	202 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	AZU1	P20160	251 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	C5orf64	Q2M2E5	130 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	CD300E	Q496F6	205 aa	Predicted RBP	10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	TTC9C	Q8N5M4	171 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	ZNF479	Q96JC4	524 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	RBAKDN	A6NC62	111 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130		B9A039	149 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	DTX2	Q86UW9	622 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	ARPC1A	Q92747	370 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	DPM3	Q9P2X0	92 aa		10.66	□□□□□ -0.7
UBE2F-223	ENST00000612130	LINC01619	G3V211	115 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	PLN	P26678	52 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	IL17REL	Q6ZVW7	336 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	OR11H6	Q8NGC7	330 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	MYOZ3	Q8TDC0	251 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	SPATA25	Q9BR10	227 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	MRPL35	Q9NZE8	188 aa	Known RBP	10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130	ONECUT1	Q9UBC0	465 aa		10.65	□□□□□ -0.7
UBE2F-223	ENST00000612130		A0A087WX48	190 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	NDUFS8	O00217	210 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	ZNF672	Q499Z4	452 aa	Predicted RBP	10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	LY6G5B	Q8NDX9	201 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	TMEM160	Q9NX00	188 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	TRAV40	A0A0B4J280	105 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	GAGE12H	A6NDE8	117 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	HLA-DMB	P28068	263 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	LAGE3	Q14657	143 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	C12orf74	Q32Q52	190 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	DYNAP	Q8N1N2	210 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	ZNF502	Q8TBZ5	544 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	GTSF1L	Q9H1H1	148 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	LOC400499	M0QZD8	3231 aa		10.64	□□□□□ -0.71
UBE2F-223	ENST00000612130	ABCA1	O95477	2261 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	GATA1	P15976	413 aa	Predicted RBP	10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	RAB9A	P51151	201 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	CUL9	Q8IWT3	2517 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130		A0A1B0GWB2	263 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	NCBP2L	A6PVI3	153 aa	Known RBP	10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	CTSG	P08311	255 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	WFDC2	Q14508	124 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	CLEC2A	Q6UVW9	174 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	NRAC	Q8N912	160 aa		10.63	□□□□□ -0.71
UBE2F-223	ENST00000612130	RRN3P1	Q2M238	152 aa		10.62	□□□□□ -0.71
UBE2F-223	ENST00000612130	IGFL4	Q6B9Z1	124 aa		10.62	□□□□□ -0.71
UBE2F-223	ENST00000612130	MAPKAPK5-AS1	Q8N8E1	139 aa		10.62	□□□□□ -0.71
UBE2F-223	ENST00000612130	TRAV12-1	A0A0B4J245	112 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	NDP	Q00604	133 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	SMAGP	Q0VAQ4	97 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	ERCC8	Q13216	396 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	HES1	Q14469	280 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	HIST1H4G	Q99525	98 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	SLC50A1	Q9BRV3	221 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	TRBV7-3	A0A075B6L6	115 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	IGKV3D-20	A0A0C4DH25	116 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130		A0A1B0GV72	72 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	ODF3B	A8MYP8	253 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	LYNX1	G3V0Z9	82 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	LYNX1	P0DP58	116 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	ZGRF1	Q86YA3	2104 aa		10.61	□□□□□ -0.71
UBE2F-223	ENST00000612130	PRAC2	D3DTV9	90 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130		H3BMG7	143 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	IGHV3-23	P01764	117 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	TRGV3	P03979	118 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	GAGE13	Q4V321	117 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	MUC3A	Q02505	3323 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	IGHV4-4	A0A075B6R2	117 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130		F8VRH5	84 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	PPIF	P30405	207 aa	Known RBP	10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	PRO0461	Q9UI25	63 aa		10.6	□□□□□ -0.71
UBE2F-223	ENST00000612130	IGHV7-4-1	A0A0J9YVY3	117 aa		10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130		H7C1H1	209 aa		10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130		M0R1W7	72 aa		10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	CD3E	P07766	207 aa		10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	MRPL53	Q96EL3	112 aa	Known RBP	10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	SPAG8	Q99932	426 aa	Predicted RBP	10.59	□□□□□ -0.71
UBE2F-223	ENST00000612130	ETDB	Q3ZM63	59 aa		10.58	□□□□□ -0.72
UBE2F-223	ENST00000612130	CCDC144NL	Q6NUI1	221 aa		10.58	□□□□□ -0.72
UBE2F-223	ENST00000612130		Q8N6K4	173 aa		10.58	□□□□□ -0.72
UBE2F-223	ENST00000612130	MRAP2	Q96G30	205 aa		10.58	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms