RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 RNF114Q9Y508 228 aa11.67□□□□□ -0.54
VRK3-218ENST00000600031 H3BRN7 92 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 ELANEP08246 267 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 NBEAP1P0C6P0 100 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 NIT1Q86X76 327 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 FN1P02751 2386 aaKnown RBP11.66□□□□□ -0.54
VRK3-218ENST00000600031 CTRLP40313 264 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
VRK3-218ENST00000600031 FMC1Q96HJ9 113 aa11.66□□□□□ -0.54
VRK3-218ENST00000600031 C3orf79P0CE67 100 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 GNG5P63218 68 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 PRR27Q6MZM9 219 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 KLHDC1Q8N7A1 406 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 RNF152Q8N8N0 203 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 C5orf17Q8NAS9 161 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 MYOZ3Q8TDC0 251 aa11.65□□□□□ -0.54
VRK3-218ENST00000600031 GP9P14770 177 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 ZNF124Q15973 351 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 CT83Q5H943 113 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 FAM162BQ5T6X4 162 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 BLNKQ8WV28 456 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 MLST8Q9BVC4 326 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 ZNF492Q9P255 531 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 RABAC1Q9UI14 185 aa11.65□□□□□ -0.55
VRK3-218ENST00000600031 CLPSL1A2RUU4 121 aa11.64□□□□□ -0.55
VRK3-218ENST00000600031 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
VRK3-218ENST00000600031 SPATA45Q537H7 98 aa11.64□□□□□ -0.55
VRK3-218ENST00000600031 F8P00451 2351 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 A0A1B0GXF2 115 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 HSBP1O75506 76 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 PMCHL1Q16048 86 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 TMEM190Q8WZ59 177 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 ALKBH7Q9BT30 221 aaPredicted RBP11.63□□□□□ -0.55
VRK3-218ENST00000600031 RPP21Q9H633 154 aaKnown RBP11.63□□□□□ -0.55
VRK3-218ENST00000600031 PEF1Q9UBV8 284 aaKnown RBP11.63□□□□□ -0.55
VRK3-218ENST00000600031 A8MWL6 223 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 NTF3P20783 257 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 FAM19A2Q8N3H0 131 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 UQCR10Q9UDW1 63 aa11.63□□□□□ -0.55
VRK3-218ENST00000600031 ZNF207O43670 478 aaKnown RBP11.62□□□□□ -0.55
VRK3-218ENST00000600031 LTAP01374 205 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 TCTEX1D4Q5JR98 221 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 UNQ9165/PRO28630Q6UXU0 137 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 JMJD8Q96S16 334 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 TCRAP04437 139 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 HBBP68871 147 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 UBE2E2Q96LR5 201 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 GFRA4Q9GZZ7 299 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 Q9H3A6 140 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 C16orf95Q9H693 158 aa11.62□□□□□ -0.55
VRK3-218ENST00000600031 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 H3BTX0 84 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 NDUFA4O00483 81 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 MRPS12O15235 138 aaKnown RBP11.61□□□□□ -0.55
VRK3-218ENST00000600031 CRLF1O75462 422 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 P01737 135 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
VRK3-218ENST00000600031 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
VRK3-218ENST00000600031 S100A7AQ86SG5 101 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 BPIFA4PQ86YQ2 179 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
VRK3-218ENST00000600031 FAM231BA6NCW3 169 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
VRK3-218ENST00000600031 IGLC2P0DOY2 106 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 IGLC3P0DOY3 106 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 G0S2P27469 103 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 CAMPP49913 170 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 HIST2H2BDQ6DRA6 164 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 DAZAP1Q96EP5 407 aaKnown RBP11.6□□□□□ -0.55
VRK3-218ENST00000600031 OTORQ9NRC9 128 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 M0R2Z0 102 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
VRK3-218ENST00000600031 GAGE1Q13065 139 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 C18orf65Q6ZTR6 163 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 METTL26Q96S19 204 aa11.6□□□□□ -0.55
VRK3-218ENST00000600031 IGHV3OR16-13A0A075B7E8 117 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 IGHV3-49A0A0A0MS15 119 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 IGHV3-74A0A0B4J1X5 117 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 IGHV3-66A0A0C4DH42 116 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 C20orf202A1L168 122 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 TCF21O43680 179 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 BUB3O43684 328 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 COL5A1-AS1Q5SY13 56 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 TCF24Q7RTU0 167 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 SGK494Q96LW2 274 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 C17orf77Q96MU5 243 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 DLEU1O43261 78 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
VRK3-218ENST00000600031 SSBP4Q9BWG4 385 aaPredicted RBP11.59□□□□□ -0.55
VRK3-218ENST00000600031 U3KQE9 123 aa11.59□□□□□ -0.55
VRK3-218ENST00000600031 RNASEKQ6P5S7 137 aaKnown RBP11.58□□□□□ -0.56
VRK3-218ENST00000600031 LINC00322Q6ZN03 302 aaPredicted RBP11.58□□□□□ -0.56
VRK3-218ENST00000600031 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
VRK3-218ENST00000600031 OR4F17Q8NGA8 305 aa11.58□□□□□ -0.56
VRK3-218ENST00000600031 OR2D3Q8NGH3 330 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms