RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-209ENST00000598570 RANP62826 216 aaKnown RBP12.58□□□□□ -0.4
USHBP1-209ENST00000598570 GFI1BQ5VTD9 330 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 ZFAND2AQ8N6M9 145 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 RXFP4Q8TDU9 374 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 TMED6Q8WW62 240 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 VGLL1Q99990 258 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 OTORQ9NRC9 128 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF492Q9P255 531 aa12.58□□□□□ -0.4
USHBP1-209ENST00000598570 A0A0D9SG52 128 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 H7BYZ3 331 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 AZU1P20160 251 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 ERCC8Q13216 396 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 FAM122CQ6P4D5 195 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF493Q6ZR52 646 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 LENEPQ9Y5L5 61 aa12.57□□□□□ -0.4
USHBP1-209ENST00000598570 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF705GA8MUZ8 300 aaPredicted RBP12.56□□□□□ -0.4
USHBP1-209ENST00000598570 DIRC3C9JPN6 131 aa12.56□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
USHBP1-209ENST00000598570 Q6ZTC4 211 aa12.56□□□□□ -0.4
USHBP1-209ENST00000598570 TCTE3Q8IZS6 198 aa12.56□□□□□ -0.4
USHBP1-209ENST00000598570 RNASE8Q8TDE3 154 aaKnown RBP12.56□□□□□ -0.4
USHBP1-209ENST00000598570 ACTR3CQ9C0K3 210 aaPredicted RBP12.56□□□□□ -0.4
USHBP1-209ENST00000598570 ALMS1Q8TCU4 4167 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 TRAV10A0A0B4J240 114 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 EIF3GO75821 320 aaKnown RBP eCLIP12.55□□□□□ -0.4
USHBP1-209ENST00000598570 PRM2P04554 102 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 ARL14EPLP0DKL9 152 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 GCHFRP30047 84 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 ZNF138P52744 262 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 FAM222AQ5U5X8 452 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 SSX7Q7RTT5 188 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 LINC01587Q99440 93 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 ARPC5LQ9BPX5 153 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 TMEM208Q9BTX3 173 aa12.55□□□□□ -0.4
USHBP1-209ENST00000598570 YTHDF2Q9Y5A9 579 aaKnown RBP12.55□□□□□ -0.4
USHBP1-209ENST00000598570 IGKV2-40A0A087WW87 121 aaPredicted RBP12.54□□□□□ -0.4
USHBP1-209ENST00000598570 LYRM9A8MSI8 78 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 CXorf1O96002 111 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 IGKV2D-40P01614 121 aaPredicted RBP12.54□□□□□ -0.4
USHBP1-209ENST00000598570 CSN1S1P47710 185 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 C2CD4CQ8TF44 421 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 PYGO2Q9BRQ0 406 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 PLA2G2EQ9NZK7 142 aa12.54□□□□□ -0.4
USHBP1-209ENST00000598570 C7orf71A4D174 169 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 PGPA6NDG6 321 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 TMEM78Q5T7P6 136 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 TMEM263Q8WUH6 116 aaKnown RBP12.53□□□□□ -0.4
USHBP1-209ENST00000598570 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 APLNQ9ULZ1 77 aa12.53□□□□□ -0.4
USHBP1-209ENST00000598570 CTXND1A0A1B0GTU2 59 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
USHBP1-209ENST00000598570 CD300CQ08708 224 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 LINC00476Q8WZB0 136 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 TMEM167BQ9NRX6 74 aa12.52□□□□□ -0.41
USHBP1-209ENST00000598570 A0A1W2PRE2 83 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 BCL2L11O43521 198 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 ANXA2RQ3ZCQ2 193 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 FAM74A1Q5RGS3 127 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 PRR9Q5T870 116 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 HYDINQ4G0P3 5121 aa12.51□□□□□ -0.41
USHBP1-209ENST00000598570 DEFB131BA0A096LNP1 70 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 SERTM2A0A1B0GWG4 89 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 EMP1P54849 157 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 DAZ2Q13117 558 aaKnown RBP12.5□□□□□ -0.41
USHBP1-209ENST00000598570 LGALS9CQ6DKI2 356 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
USHBP1-209ENST00000598570 Q6AWC8 147 aa12.49□□□□□ -0.41
USHBP1-209ENST00000598570 TMUB2Q71RG4 321 aa12.49□□□□□ -0.41
USHBP1-209ENST00000598570 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
USHBP1-209ENST00000598570 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
USHBP1-209ENST00000598570 MBD3L1Q8WWY6 194 aa12.49□□□□□ -0.41
USHBP1-209ENST00000598570 TIMM8BQ9Y5J9 83 aaPredicted RBP12.49□□□□□ -0.41
USHBP1-209ENST00000598570 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 UMAD1C9J7I0 102 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 C1QBP02746 253 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 GPX1P07203 203 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 BTN1A1Q13410 526 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 LGALSLQ3ZCW2 172 aaPredicted RBP12.48□□□□□ -0.41
USHBP1-209ENST00000598570 AKR1C8PQ5T2L2 129 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 ZNF767PQ75MW2 155 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 TVP23CQ96ET8 276 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
USHBP1-209ENST00000598570 CBY3A6NI87 242 aa12.47□□□□□ -0.41
USHBP1-209ENST00000598570 TCRAP04437 139 aa12.47□□□□□ -0.41
USHBP1-209ENST00000598570 RNASE4P34096 147 aaKnown RBP12.47□□□□□ -0.41
USHBP1-209ENST00000598570 DPPA3Q6W0C5 159 aa12.47□□□□□ -0.41
USHBP1-209ENST00000598570 Q8TAT8 98 aa12.47□□□□□ -0.41
USHBP1-209ENST00000598570 NKX6-2Q9C056 277 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms