RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 M0R2Z0 102 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 DUSP14O95147 198 aaKnown RBP7.66□□□□□ -1.18
LIG1-210ENST00000596332 CA1P00915 261 aaPredicted RBP7.66□□□□□ -1.18
LIG1-210ENST00000596332 H2AFB1P0C5Y9 115 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 APOC4P55056 127 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
LIG1-210ENST00000596332 GNG5P63218 68 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 PMS2P11Q13670 270 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 ZNF705AQ6ZN79 300 aaPredicted RBP7.66□□□□□ -1.18
LIG1-210ENST00000596332 Q6ZQT7 251 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 ZFAND2AQ8N6M9 145 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 TMEM167BQ9NRX6 74 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 PPP1R14DQ9NXH3 145 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 XCL2Q9UBD3 114 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 TP53TG1Q9Y2A0 90 aa7.66□□□□□ -1.18
LIG1-210ENST00000596332 RBAKDNA6NC62 111 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 SPRY2O43597 315 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 PRM2P04554 102 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 SPINK13Q1W4C9 94 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 PRR9Q5T870 116 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 EIF5AL1Q6IS14 154 aaKnown RBP7.65□□□□□ -1.18
LIG1-210ENST00000596332 LINC00477Q96M19 166 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 LINC00479Q96M42 142 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 SPATA25Q9BR10 227 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 EDA2RQ9HAV5 297 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 ZNF492Q9P255 531 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 EPDR1Q9UM22 224 aa7.65□□□□□ -1.18
LIG1-210ENST00000596332 TRAV12-2A0A075B6T6 113 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 TRAV8-1A0A0A6YYK1 113 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 A0A1B0GV50 99 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 KLLNB2CW77 178 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 PAGE4O60829 102 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 TCRAP04437 139 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 SLC25A5P05141 298 aaKnown RBP7.64□□□□□ -1.19
LIG1-210ENST00000596332 CRISP2P16562 243 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 ATP5G3P48201 142 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 UBE2G2P60604 165 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 RXFP4Q8TDU9 374 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 RCHY1Q96PM5 261 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 ODF3Q96PU9 254 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 MED9Q9NWA0 146 aa7.64□□□□□ -1.19
LIG1-210ENST00000596332 ZNF324O75467 553 aaPredicted RBP7.63□□□□□ -1.19
LIG1-210ENST00000596332 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 Q8NAQ8 132 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 C5orf17Q8NAS9 161 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 OR10J6PQ8NGY7 276 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 Q8TAT8 98 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 SGK494Q96LW2 274 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 IGF2BP2-AS1Q96M15 143 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 KLF12Q9Y4X4 402 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 U3KQK5 164 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 ARL2-SNX15V9GYD0 113 aa7.63□□□□□ -1.19
LIG1-210ENST00000596332 CDKN1BP46527 198 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 ZNF138P52744 262 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 GFI1BQ5VTD9 330 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 ZNF575Q86XF7 245 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 OR11H2Q8NH07 326 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 NEU1Q99519 415 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 DNAH7Q8WXX0 4024 aa7.62□□□□□ -1.19
LIG1-210ENST00000596332 TRAV34A0A0B4J273 112 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 PLAC8L1A1L4L8 177 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 NMBP08949 121 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 AZU1P20160 251 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 NUTF2P61970 127 aaKnown RBP7.61□□□□□ -1.19
LIG1-210ENST00000596332 COMMD7Q86VX2 200 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 IQCF2Q8IXL9 164 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 C2CD4CQ8TF44 421 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 PCNPQ8WW12 178 aaKnown RBP7.61□□□□□ -1.19
LIG1-210ENST00000596332 RARRES2Q99969 163 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
LIG1-210ENST00000596332 AMBPP02760 352 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 CSN1S1P47710 185 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 ZNF80P51504 273 aaPredicted RBP7.6□□□□□ -1.19
LIG1-210ENST00000596332 BTN1A1Q13410 526 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 ATG101Q9BSB4 218 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 C1QTNF4Q9BXJ3 329 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 NKX6-2Q9C056 277 aaPredicted RBP7.6□□□□□ -1.19
LIG1-210ENST00000596332 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 PSG8Q9UQ74 426 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 LENEPQ9Y5L5 61 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 CSMD3Q7Z407 3707 aa7.6□□□□□ -1.19
LIG1-210ENST00000596332 IGHV4-28A0A0C4DH34 117 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 KRBOX1C9JBD0 128 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 PEX7O00628 323 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 DEFB4AO15263 64 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 CRIP1P50238 77 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 BLOC1S1P78537 153 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 TMEM78Q5T7P6 136 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 CST9LP1Q5W188 147 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 COX8CQ7Z4L0 72 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 TMEM75Q8N9X5 138 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 CMTM2Q8TAZ6 248 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 HIST1H2BAQ96A08 127 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 C11orf52Q96A22 123 aa7.59□□□□□ -1.19
LIG1-210ENST00000596332 C8orf49Q96NF6 230 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms