RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 CD5LO43866 347 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 RAB1BQ9H0U4 201 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 AAMDCQ9H7C9 122 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 RABAC1Q9UI14 185 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 C7orf71A4D174 169 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 NPYP01303 97 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 FBXL19-AS1Q494R0 122 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
ZNF541-205ENST00000595558 DPM3Q9P2X0 92 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 U3KQK5 164 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 ABCA2Q9BZC7 2435 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 IGHG4P01861 327 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 PAX8Q06710 450 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 TWIST1Q15672 202 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 ORMDL3Q8N138 153 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 RNF5Q99942 180 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 SMAD5-AS1Q9Y6J3 95 aa11.92□□□□□ -0.5
ZNF541-205ENST00000595558 A0A1B0GW15 77 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 C11orf71Q6IPW1 123 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 LY6G5BQ8NDX9 201 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 PRR25Q96S07 402 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 C5orf64Q2M2E5 130 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 Q6AWC8 147 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 VMO1Q7Z5L0 202 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 THYN1Q9P016 225 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 ZNF462Q96JM2 2506 aa11.91□□□□□ -0.5
ZNF541-205ENST00000595558 PCP2Q8IVA1 136 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 C18orf15Q96N68 181 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
ZNF541-205ENST00000595558 DKK2Q9UBU2 259 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 EPG5Q9HCE0 2579 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 NDUFA3O95167 84 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 PPIFP30405 207 aaKnown RBP11.9□□□□□ -0.5
ZNF541-205ENST00000595558 CKS2P33552 79 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 MFAP4P55083 255 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 NPBQ8NG41 125 aa11.9□□□□□ -0.5
ZNF541-205ENST00000595558 GAGE12BA1L429 117 aa11.9□□□□□ -0.51
ZNF541-205ENST00000595558 OR11H6Q8NGC7 330 aa11.9□□□□□ -0.51
ZNF541-205ENST00000595558 JMJD8Q96S16 334 aa11.9□□□□□ -0.51
ZNF541-205ENST00000595558 C21orf62Q9NYP8 219 aa11.9□□□□□ -0.51
ZNF541-205ENST00000595558 GNLYP22749 145 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 ERCC8Q13216 396 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 PDE6HQ13956 83 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 FBN2P35556 2912 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 PRAC2D3DTV9 90 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 ARPC1AQ92747 370 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 TIMD4Q96H15 378 aa11.89□□□□□ -0.51
ZNF541-205ENST00000595558 LINC01548A6NM66 108 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 HBDP02042 147 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 CTSGP08311 255 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 GATA1P15976 413 aaPredicted RBP11.88□□□□□ -0.51
ZNF541-205ENST00000595558 TTTY13Q9BZ97 58 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 EVI2AP22794 236 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 NMUP48645 174 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 LGALS9BQ3B8N2 356 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 IFI27L1Q96BM0 104 aa11.88□□□□□ -0.51
ZNF541-205ENST00000595558 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
ZNF541-205ENST00000595558 DOPEY2Q9Y3R5 2298 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 IGHV3-66A0A0C4DH42 116 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 ORM1P02763 201 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 TM4SF20Q53R12 229 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 RNF182Q8N6D2 247 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 PSMG3-AS1Q96PY0 264 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 TLN2Q9Y4G6 2542 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 PTPN13Q12923 2485 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 RAB37Q96AX2 223 aa11.87□□□□□ -0.51
ZNF541-205ENST00000595558 IGHV3OR16-13A0A075B7E8 117 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 IGHV3-74A0A0B4J1X5 117 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 ODF3BA8MYP8 253 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 SAP30O75446 220 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 ZNF562Q6V9R5 426 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 VPS25Q9BRG1 176 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 DOPEY1Q5JWR5 2465 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 H3BUT2 72 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 SMAD7O15105 426 aaKnown RBP11.86□□□□□ -0.51
ZNF541-205ENST00000595558 UCNP55089 124 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 MXRA5Q9NR99 2828 aa11.86□□□□□ -0.51
ZNF541-205ENST00000595558 RPL7P18124 248 aaKnown RBP11.85□□□□□ -0.51
ZNF541-205ENST00000595558 PRTN3P24158 256 aa11.85□□□□□ -0.51
ZNF541-205ENST00000595558 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
ZNF541-205ENST00000595558 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
ZNF541-205ENST00000595558 LINC00527Q9UJ94 153 aa11.85□□□□□ -0.51
ZNF541-205ENST00000595558 TTC9CQ8N5M4 171 aa11.85□□□□□ -0.51
ZNF541-205ENST00000595558 USP24Q9UPU5 2620 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 IGKV2D-26A0A0A0MRZ7 120 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 GAGE10A6NGK3 116 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 CEACAM3P40198 252 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 SEC11AP67812 179 aa11.84□□□□□ -0.51
ZNF541-205ENST00000595558 KIR3DS1Q14943 382 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms