RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 THYN1Q9P016 225 aa12.84□□□□□ -0.35
LIG1-206ENST00000594067 A6NDN8 102 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 H3BUT2 72 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
LIG1-206ENST00000594067 CTSGP08311 255 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 ADAMTSL5Q6ZMM2 481 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 FER1L6-AS1Q8NA97 138 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 GTF2H5Q6ZYL4 71 aa12.83□□□□□ -0.36
LIG1-206ENST00000594067 A1L4Q6 167 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 HBDP02042 147 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 TMEM11P17152 192 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 Q8N6K4 173 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 AP1S3Q96PC3 154 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 NAA38Q9BRA0 125 aaKnown RBP12.82□□□□□ -0.36
LIG1-206ENST00000594067 SIVA1O15304 175 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 IGHG4P01861 327 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 ADORA2A-AS1P86434 159 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 HSD52Q0P140 79 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 TWIST1Q15672 202 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 OR9G4Q8NGQ1 327 aa12.82□□□□□ -0.36
LIG1-206ENST00000594067 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 IGHV7-81A0A0B4J1V7 117 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
LIG1-206ENST00000594067 C11orf71Q6IPW1 123 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 PCP2Q8IVA1 136 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 IFI27L1Q96BM0 104 aa12.81□□□□□ -0.36
LIG1-206ENST00000594067 A0A0G2JLM5 398 aa12.8□□□□□ -0.36
LIG1-206ENST00000594067 K7EP34 96 aa12.8□□□□□ -0.36
LIG1-206ENST00000594067 NPYP01303 97 aa12.8□□□□□ -0.36
LIG1-206ENST00000594067 CKS2P33552 79 aa12.8□□□□□ -0.36
LIG1-206ENST00000594067 COX8CQ7Z4L0 72 aa12.8□□□□□ -0.36
LIG1-206ENST00000594067 NDUFS7O75251 213 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 ERCC8Q13216 396 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 OR4X2Q8NGF9 303 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 OR2K2Q8NGT1 345 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 MSRB1Q9NZV6 116 aa12.79□□□□□ -0.36
LIG1-206ENST00000594067 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
LIG1-206ENST00000594067 ORM1P02763 201 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 BMI1P35226 326 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 ZNF575Q86XF7 245 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 RAB37Q96AX2 223 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 MSRB2Q9Y3D2 182 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 MED13LQ71F56 2210 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 S100A7P31151 101 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 EBI3Q14213 229 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 ECSCRQ19T08 205 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 Q8N9W7 124 aa12.78□□□□□ -0.36
LIG1-206ENST00000594067 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 PRAC2D3DTV9 90 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 G3V4G9 280 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 SCGB2A1O75556 95 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 IGLC6P0CF74 106 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 NMUP48645 174 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 WFDC3Q8IUB2 231 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 COL25A1Q9BXS0 654 aaPredicted RBP12.77□□□□□ -0.36
LIG1-206ENST00000594067 WNK2Q9Y3S1 2297 aa12.77□□□□□ -0.36
LIG1-206ENST00000594067 RIPPLY3P57055 190 aa12.77□□□□□ -0.37
LIG1-206ENST00000594067 OOSP1A8MZH6 123 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 C15orf32Q32M92 178 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 RNF182Q8N6D2 247 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 MINOS1-NBL1R4GNA1 71 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 IGHV3OR16-13A0A075B7E8 117 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 IGHV3-74A0A0B4J1X5 117 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 NEGR1Q7Z3B1 354 aa12.76□□□□□ -0.37
LIG1-206ENST00000594067 GAS8-AS1O95177 125 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
LIG1-206ENST00000594067 NPFFR1Q9GZQ6 430 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
LIG1-206ENST00000594067 CLEC3BP05452 202 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 ZNF502Q8TBZ5 544 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 RNF185Q96GF1 192 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 SIRPDQ9H106 197 aa12.75□□□□□ -0.37
LIG1-206ENST00000594067 ASH1LQ9NR48 2969 aaKnown RBP12.74□□□□□ -0.37
LIG1-206ENST00000594067 FABP5P3A8MUU1 101 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 C18orf15Q96N68 181 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 FAM110DQ8TAY7 271 aaPredicted RBP12.74□□□□□ -0.37
LIG1-206ENST00000594067 PIFOQ8TCI5 191 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 ZFAND3Q9H8U3 227 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 SPCS1Q9Y6A9 102 aa12.74□□□□□ -0.37
LIG1-206ENST00000594067 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 BUB3O43684 328 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 PSMG3-AS1Q96PY0 264 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 IGKV2D-26A0A0A0MRZ7 120 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 IGHV3-49A0A0A0MS15 119 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.73□□□□□ -0.37
LIG1-206ENST00000594067 LINC01546A6NGU7 62 aa12.72□□□□□ -0.37
LIG1-206ENST00000594067 LINC01548A6NM66 108 aa12.72□□□□□ -0.37
LIG1-206ENST00000594067 G3V318 75 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms