RNA–Protein interactions for RNA: ENST00000593594.1

PDE4C-205, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-205ENST00000593594 HOXA5P20719 270 aa12.88□□□□□ -0.35
PDE4C-205ENST00000593594 TAS2R30P59541 319 aa12.88□□□□□ -0.35
PDE4C-205ENST00000593594 EIF5AL1Q6IS14 154 aaKnown RBP12.88□□□□□ -0.35
PDE4C-205ENST00000593594 SELENOTP62341 195 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 VAMP2P63027 116 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 DLK1P80370 383 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 BAXQ07812 192 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 KIR3DS1Q14943 382 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 SLC7A5P1Q8MH63 180 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
PDE4C-205ENST00000593594 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
PDE4C-205ENST00000593594 MRPS16Q9Y3D3 137 aaKnown RBP12.87□□□□□ -0.35
PDE4C-205ENST00000593594 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 MRPS12O15235 138 aaKnown RBP12.86□□□□□ -0.35
PDE4C-205ENST00000593594 GAGE7O76087 117 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
PDE4C-205ENST00000593594 ALKAL2Q6UX46 152 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 PATE2Q6UY27 113 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 S100A7AQ86SG5 101 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 ZNF586Q9NXT0 402 aa12.86□□□□□ -0.35
PDE4C-205ENST00000593594 BORCS7-ASMTA0A0B4J1R7 106 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 PMS2P5A8MQ11 134 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 H3BNG1 76 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 NMBP08949 121 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 PARD6GQ9BYG4 376 aaPredicted RBP12.85□□□□□ -0.35
PDE4C-205ENST00000593594 ARV1Q9H2C2 271 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 ZNF331Q9NQX6 463 aaPredicted RBP12.85□□□□□ -0.35
PDE4C-205ENST00000593594 PSENENQ9NZ42 101 aa12.85□□□□□ -0.35
PDE4C-205ENST00000593594 SSSCA1O60232 199 aa12.84□□□□□ -0.35
PDE4C-205ENST00000593594 GFI1BQ5VTD9 330 aa12.84□□□□□ -0.35
PDE4C-205ENST00000593594 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
PDE4C-205ENST00000593594 SMIM8Q96KF7 97 aa12.84□□□□□ -0.35
PDE4C-205ENST00000593594 DMBT1Q9UGM3 2413 aaPredicted RBP12.84□□□□□ -0.35
PDE4C-205ENST00000593594 SNURFLB1AK76 121 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 EPM2AB3EWF7 344 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 SNRPCP09234 159 aaKnown RBP12.83□□□□□ -0.36
PDE4C-205ENST00000593594 ZNF266Q14584 549 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 RNF24Q9Y225 148 aa12.83□□□□□ -0.36
PDE4C-205ENST00000593594 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
PDE4C-205ENST00000593594 LINC00315P59091 139 aa12.82□□□□□ -0.36
PDE4C-205ENST00000593594 STX12Q86Y82 276 aa12.82□□□□□ -0.36
PDE4C-205ENST00000593594 NPVFQ9HCQ7 196 aa12.82□□□□□ -0.36
PDE4C-205ENST00000593594 IGSF23A1L1A6 192 aa12.81□□□□□ -0.36
PDE4C-205ENST00000593594 CAV2P51636 162 aa12.81□□□□□ -0.36
PDE4C-205ENST00000593594 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
PDE4C-205ENST00000593594 Q6ZRN7 208 aaPredicted RBP12.81□□□□□ -0.36
PDE4C-205ENST00000593594 TMPRSS5Q9H3S3 457 aa12.81□□□□□ -0.36
PDE4C-205ENST00000593594 FAM24AA6NFZ4 105 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 J3KRW8 73 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 SLC17A3O00476 420 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 SEC11BP0C7V7 166 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 SULT1A1P50225 295 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 SLC38A11Q08AI6 406 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 TEPPQ6URK8 271 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 TMEM14EPQ6UXP3 125 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 Q6ZTI0 123 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 LINC00305Q7Z4B0 112 aa12.8□□□□□ -0.36
PDE4C-205ENST00000593594 SAT2Q96F10 170 aaPredicted RBP12.8□□□□□ -0.36
PDE4C-205ENST00000593594 A0A096LPF7 62 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 H3BTX0 84 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 METTL15P1P0C7V9 234 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 NHLH2Q02577 135 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 DAZ2Q13117 558 aaKnown RBP12.79□□□□□ -0.36
PDE4C-205ENST00000593594 BPIFA4PQ86YQ2 179 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 VSIG2Q96IQ7 327 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
PDE4C-205ENST00000593594 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
PDE4C-205ENST00000593594 EIF4E3Q8N5X7 224 aaKnown RBP12.78□□□□□ -0.36
PDE4C-205ENST00000593594 OR10P1Q8NGE3 313 aa12.78□□□□□ -0.36
PDE4C-205ENST00000593594 INAFM2P0DMQ5 153 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 CT45A10P0DMU9 189 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 LEPP41159 167 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 SULT1A2P50226 295 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 RAB5CP51148 216 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 HBG1P69891 147 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 HBG2P69892 147 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 MORN5Q5VZ52 161 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 COMMD7Q86VX2 200 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 PYGO2Q9BRQ0 406 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
PDE4C-205ENST00000593594 AGPAT2O15120 278 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 SIVA1O15304 175 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 IGLC2P0DOY2 106 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 FUSP35637 526 aaKnown RBP eCLIP12.76□□□□□ -0.37
PDE4C-205ENST00000593594 XGP55808 180 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 LYPD1Q8N2G4 141 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 TMEM37Q8WXS4 190 aa12.76□□□□□ -0.37
PDE4C-205ENST00000593594 ODF3Q96PU9 254 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms