RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 TRAV8-2A0A0B4J237 113 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 BMI1P35226 326 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 ZNF80P51504 273 aaPredicted RBP15.1■□□□□ 0.01
CLIP3-206ENST00000593074 RNASEKQ6P5S7 137 aaKnown RBP15.1■□□□□ 0.01
CLIP3-206ENST00000593074 Q6ZS46 218 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 C8orf86Q6ZUL3 223 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV3-49A0A0A0MS15 119 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 NDUFA4O00483 81 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 TRBV12-3P01733 135 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 NTF3P20783 257 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 SRSF2Q01130 221 aaKnown RBP15.1■□□□□ 0.01
CLIP3-206ENST00000593074 GLMPQ8WWB7 406 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 ZNF580Q9UK33 172 aa15.1■□□□□ 0.01
CLIP3-206ENST00000593074 CSMD2Q7Z408 3487 aa15.09■□□□□ 0.01
CLIP3-206ENST00000593074 IGLV1-40P01703 118 aa15.09■□□□□ 0.01
CLIP3-206ENST00000593074 BORCS7Q96B45 105 aa15.09■□□□□ 0.01
CLIP3-206ENST00000593074 CFHR3Q02985 330 aa15.08■□□□□ 0.01
CLIP3-206ENST00000593074 ERCC8Q13216 396 aa15.08■□□□□ 0.01
CLIP3-206ENST00000593074 NDUFAF3Q9BU61 184 aa15.08■□□□□ 0.01
CLIP3-206ENST00000593074 IGHV4-59P01825 116 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 RPS20P60866 119 aaKnown RBP15.08■□□□□ 0
CLIP3-206ENST00000593074 LYZL1Q6UWQ5 148 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 UNQ9165/PRO28630Q6UXU0 137 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 ZNF493Q6ZR52 646 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 TPPP3Q9BW30 176 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 KLK15Q9H2R5 256 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 POLQO75417 2590 aa15.08■□□□□ 0
CLIP3-206ENST00000593074 C3orf79P0CE67 100 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 CHCHD1Q96BP2 118 aaKnown RBP15.07■□□□□ 0
CLIP3-206ENST00000593074 MAP1AP78559 2803 aaPredicted RBP15.07■□□□□ 0
CLIP3-206ENST00000593074 PTPN13Q12923 2485 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 TMSB15BA0A087X1C1 80 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 M0R2Z0 102 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 PF4V1P10720 104 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 CTRLP40313 264 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 DMRTA1Q5VZB9 504 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 PSMG3-AS1Q96PY0 264 aa15.07■□□□□ 0
CLIP3-206ENST00000593074 Q96MF0 132 aa15.06■□□□□ 0
CLIP3-206ENST00000593074 CLEC5AQ9NY25 188 aa15.06■□□□□ 0
CLIP3-206ENST00000593074 FAM181BA6NEQ2 426 aa15.05■□□□□ 0
CLIP3-206ENST00000593074 TDRG1Q3Y452 100 aa15.05■□□□□ 0
CLIP3-206ENST00000593074 PRSS57Q6UWY2 283 aa15.05■□□□□ 0
CLIP3-206ENST00000593074 ZNF575Q86XF7 245 aa15.05■□□□□ 0
CLIP3-206ENST00000593074 C20orf144Q9BQM9 153 aa15.05■□□□□ 0
CLIP3-206ENST00000593074 USP9YO00507 2555 aaPredicted RBP15.05■□□□□ 0
CLIP3-206ENST00000593074 FABP5P3A8MUU1 101 aa15.05■□□□□ -0
CLIP3-206ENST00000593074 FSHBP01225 129 aa15.05■□□□□ -0
CLIP3-206ENST00000593074 IGLC6P0CF74 106 aa15.05■□□□□ -0
CLIP3-206ENST00000593074 IL17RELQ6ZVW7 336 aa15.05■□□□□ -0
CLIP3-206ENST00000593074 A0A0G2JLM5 398 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 M0QZ24 198 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 SMAD7O15105 426 aaKnown RBP15.04■□□□□ -0
CLIP3-206ENST00000593074 IGHV3-11P01762 117 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 C9orf139Q6ZV77 190 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 VAMP8Q9BV40 100 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 AGPAT4-IT1Q9H0P7 198 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 LINC01559Q495D7 138 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 C9orf47Q6ZRZ4 202 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 FER1L6-AS1Q8NA97 138 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 OR4X2Q8NGF9 303 aa15.04■□□□□ -0
CLIP3-206ENST00000593074 PPP1R14DQ9NXH3 145 aa15.03■□□□□ -0
CLIP3-206ENST00000593074 CENPEQ02224 2701 aa15.03■□□□□ -0
CLIP3-206ENST00000593074 CSPG4Q6UVK1 2322 aa15.03■□□□□ -0
CLIP3-206ENST00000593074 TMEM213A2RRL7 107 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 LINC00614P0C842 121 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 ZNF138P52744 262 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 TMEM78Q5T7P6 136 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 CYB5R2Q6BCY4 276 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 GPHB5Q86YW7 130 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 NPFFR1Q9GZQ6 430 aa15.02■□□□□ -0
CLIP3-206ENST00000593074 NAV2Q8IVL1 2488 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 IGHV1-24A0A0C4DH33 117 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 C2orf70A6NJV1 201 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 J3QKU1 62 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 PLA2G2AP14555 144 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 EBLN2Q6P2I7 272 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 LCNL1Q6ZST4 164 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 C16orf92Q96LL3 132 aa15.02□□□□□ -0.01
CLIP3-206ENST00000593074 KRTAP1-3Q8IUG1 177 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 CNFNQ9BYD5 112 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 PAM16Q9Y3D7 125 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 ORM1P02763 201 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 FAM104BQ5XKR9 115 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 Q6YL49 198 aa15.01□□□□□ -0.01
CLIP3-206ENST00000593074 SOCS3O14543 225 aa15□□□□□ -0.01
CLIP3-206ENST00000593074 RAB4AP20338 218 aa15□□□□□ -0.01
CLIP3-206ENST00000593074 HIST1H1AQ02539 215 aaPredicted RBP15□□□□□ -0.01
CLIP3-206ENST00000593074 TMEM95Q3KNT9 176 aa15□□□□□ -0.01
CLIP3-206ENST00000593074 U3KQK5 164 aa15□□□□□ -0.01
CLIP3-206ENST00000593074 BTF3P20290 206 aaKnown RBP14.99□□□□□ -0.01
CLIP3-206ENST00000593074 PSMB8P28062 276 aa14.99□□□□□ -0.01
CLIP3-206ENST00000593074 C20orf173Q96LM9 149 aa14.99□□□□□ -0.01
CLIP3-206ENST00000593074 VPREB3Q9UKI3 123 aa14.99□□□□□ -0.01
CLIP3-206ENST00000593074 ABCA12Q86UK0 2595 aa14.99□□□□□ -0.01
CLIP3-206ENST00000593074 PMCHL1Q16048 86 aa14.99□□□□□ -0.01
CLIP3-206ENST00000593074 CR1P17927 2039 aa14.98□□□□□ -0.01
CLIP3-206ENST00000593074 AMN1Q8IY45 258 aa14.97□□□□□ -0.01
CLIP3-206ENST00000593074 DAZ1Q9NQZ3 744 aaKnown RBP14.97□□□□□ -0.01
CLIP3-206ENST00000593074 LENEPQ9Y5L5 61 aa14.97□□□□□ -0.01
CLIP3-206ENST00000593074 MUC21A0A0G2JKD1 596 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms