RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 CCL18P55774 89 aa16.25■□□□□ 0.19
MBD3-211ENST00000592965 DAZ2Q13117 558 aaKnown RBP16.25■□□□□ 0.19
MBD3-211ENST00000592965 CLINT1Q14677 625 aa16.25■□□□□ 0.19
MBD3-211ENST00000592965 BLNKQ8WV28 456 aa16.25■□□□□ 0.19
MBD3-211ENST00000592965 LINC00477Q96M19 166 aa16.25■□□□□ 0.19
MBD3-211ENST00000592965 AAMDCQ9H7C9 122 aa16.25■□□□□ 0.19
MBD3-211ENST00000592965 ERCC8Q13216 396 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 MIR17HGQ75NE6 70 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 EXOC3-AS1Q8N2X6 119 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 ZNF503Q96F45 646 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 MRPL32Q9BYC8 188 aaKnown RBP16.24■□□□□ 0.19
MBD3-211ENST00000592965 WDR61Q9GZS3 305 aaKnown RBP16.24■□□□□ 0.19
MBD3-211ENST00000592965 AGPAT4-IT1Q9H0P7 198 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 LINC00588Q9Y4M8 146 aa16.24■□□□□ 0.19
MBD3-211ENST00000592965 NBDYA0A0U1RRE5 68 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 GAGE12BA1L429 117 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 GAGE7O76087 117 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 GAGE12FP0CL80 117 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 GAGE12GP0CL81 117 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 GAGE12IP0CL82 117 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 M6PRP20645 277 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 C9orf47Q6ZRZ4 202 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 ZNF680Q8NEM1 530 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 LINC00467Q9BRT7 94 aa16.23■□□□□ 0.19
MBD3-211ENST00000592965 MUC4Q99102 2169 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 TRAV26-1A0A087WT03 109 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 NMBP08949 121 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 CRISP2P16562 243 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 OR5I1Q13606 314 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 ICAM4Q14773 271 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 RXFP4Q8TDU9 374 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 GNPNAT1Q96EK6 184 aaPredicted RBP16.22■□□□□ 0.19
MBD3-211ENST00000592965 KRTAP17-1Q9BYP8 105 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 ALG5Q9Y673 324 aa16.22■□□□□ 0.19
MBD3-211ENST00000592965 SSNA1O43805 119 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 ZNF324O75467 553 aaPredicted RBP16.21■□□□□ 0.19
MBD3-211ENST00000592965 PTTG1O95997 202 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 NBEAP1P0C6P0 100 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 MED14OSP0DP75 135 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 HOXA5P20719 270 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 CD300CQ08708 224 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 C11orf72Q8NBR9 251 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 PPP1R1CQ8WVI7 109 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 FXYD5Q96DB9 178 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 OR51M1Q9H341 326 aa16.21■□□□□ 0.19
MBD3-211ENST00000592965 IGKV2-40A0A087WW87 121 aaPredicted RBP16.2■□□□□ 0.18
MBD3-211ENST00000592965 H3BNG1 76 aa16.2■□□□□ 0.18
MBD3-211ENST00000592965 IGKV2D-40P01614 121 aaPredicted RBP16.2■□□□□ 0.18
MBD3-211ENST00000592965 BTN1A1Q13410 526 aa16.2■□□□□ 0.18
MBD3-211ENST00000592965 ANXA2RQ3ZCQ2 193 aa16.2■□□□□ 0.18
MBD3-211ENST00000592965 Q6ZTI0 123 aa16.2■□□□□ 0.18
MBD3-211ENST00000592965 FUT9Q9Y231 359 aa16.2■□□□□ 0.18
MBD3-211ENST00000592965 C17orf112F2Z3M2 114 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 TMEM78Q5T7P6 136 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 FAM122CQ6P4D5 195 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 SSX7Q7RTT5 188 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 EIF4E3Q8N5X7 224 aaKnown RBP16.19■□□□□ 0.18
MBD3-211ENST00000592965 ZFAND2AQ8N6M9 145 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 C18orf15Q96N68 181 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 ATP5SQ99766 215 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 PAXXQ9BUH6 204 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 TMPRSS5Q9H3S3 457 aa16.19■□□□□ 0.18
MBD3-211ENST00000592965 RNASE4P34096 147 aaKnown RBP16.18■□□□□ 0.18
MBD3-211ENST00000592965 VGLL1Q99990 258 aa16.18■□□□□ 0.18
MBD3-211ENST00000592965 GSN-AS1Q9NRJ2 163 aa16.18■□□□□ 0.18
MBD3-211ENST00000592965 GPX1P07203 203 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 OR10J4P0C629 311 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 PET100P0DJ07 73 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 C6orf223Q8N319 242 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 PHYHIPLQ96FC7 376 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 ZNF492Q9P255 531 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 HSPB11Q9Y547 144 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 RYR1P21817 5038 aa16.17■□□□□ 0.18
MBD3-211ENST00000592965 TRBV7-9A0A0J9YWB2 115 aa16.16■□□□□ 0.18
MBD3-211ENST00000592965 A0A0J9YY99 117 aa16.16■□□□□ 0.18
MBD3-211ENST00000592965 MPC2O95563 127 aa16.16■□□□□ 0.18
MBD3-211ENST00000592965 PRR9Q5T870 116 aa16.16■□□□□ 0.18
MBD3-211ENST00000592965 OR7C2O60412 319 aa16.15■□□□□ 0.18
MBD3-211ENST00000592965 TCL1AP56279 114 aa16.15■□□□□ 0.18
MBD3-211ENST00000592965 TRGV2A0A075B6R0 118 aa16.14■□□□□ 0.17
MBD3-211ENST00000592965 ZNF138P52744 262 aa16.14■□□□□ 0.17
MBD3-211ENST00000592965 IBA57Q5T440 356 aaKnown RBP16.14■□□□□ 0.17
MBD3-211ENST00000592965 LYPD1Q8N2G4 141 aa16.14■□□□□ 0.17
MBD3-211ENST00000592965 UPK3BQ9BT76 320 aa16.14■□□□□ 0.17
MBD3-211ENST00000592965 TRGV1A0A0A0MS02 117 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 SPINK4O60575 86 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 TNP2Q05952 138 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 FFAR4Q5NUL3 377 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 Q9H8V8 135 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 KLF12Q9Y4X4 402 aa16.13■□□□□ 0.17
MBD3-211ENST00000592965 IGHV1OR15-1A0A075B7D0 117 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 RBAKDNA6NC62 111 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 RGS13O14921 159 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 IFNA5P01569 189 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 RPL12P30050 165 aaKnown RBP16.12■□□□□ 0.17
MBD3-211ENST00000592965 CSN1S1P47710 185 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 UBE2L3P68036 154 aaKnown RBP16.12■□□□□ 0.17
MBD3-211ENST00000592965 Q8TAT8 98 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 MBD2Q9UBB5 411 aa16.12■□□□□ 0.17
MBD3-211ENST00000592965 RANP62826 216 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms