RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 U3KQK5 164 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 D6R8Y8 96 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 TCAPO15273 167 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 ORM1P02763 201 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 IGLC6P0CF74 106 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 AMN1Q8IY45 258 aa12.76□□□□□ -0.37
PRKCSH-217ENST00000592741 IGHV4-30-2A0A087WSY4 118 aa12.75□□□□□ -0.37
PRKCSH-217ENST00000592741 TWIST1Q15672 202 aa12.75□□□□□ -0.37
PRKCSH-217ENST00000592741 ORMDL3Q8N138 153 aa12.75□□□□□ -0.37
PRKCSH-217ENST00000592741 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
PRKCSH-217ENST00000592741 IGF1P05019 195 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 ARL3P36405 182 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 BATFQ16520 125 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 LY6EQ16553 131 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 PET117Q6UWS5 81 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 PRELID3AQ96N28 172 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 ABCA2Q9BZC7 2435 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 TRAV8-2A0A0B4J237 113 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
PRKCSH-217ENST00000592741 MSMBP08118 114 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 IGLL1P15814 213 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 LINC01559Q495D7 138 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 MRPL51Q4U2R6 128 aaKnown RBP12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 TMEM78Q5T7P6 136 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 OR10AG1Q8NH19 301 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 A6NDX4 124 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 H3BUA1 57 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 H3BUX3 64 aa12.73□□□□□ -0.37
PRKCSH-217ENST00000592741 AKAP6Q13023 2319 aa12.72□□□□□ -0.37
PRKCSH-217ENST00000592741 IFI27P40305 119 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-217ENST00000592741 AGPAT4-IT1Q9H0P7 198 aa12.72□□□□□ -0.37
PRKCSH-217ENST00000592741 TIMM8BQ9Y5J9 83 aaPredicted RBP12.72□□□□□ -0.37
PRKCSH-217ENST00000592741 ASH1LQ9NR48 2969 aaKnown RBP12.72□□□□□ -0.37
PRKCSH-217ENST00000592741 IGHG2P01859 326 aa12.71□□□□□ -0.37
PRKCSH-217ENST00000592741 HIST1H1AQ02539 215 aaPredicted RBP12.71□□□□□ -0.37
PRKCSH-217ENST00000592741 USMG5Q96IX5 58 aa12.71□□□□□ -0.37
PRKCSH-217ENST00000592741 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
PRKCSH-217ENST00000592741 SIGLEC8Q9NYZ4 499 aa12.71□□□□□ -0.37
PRKCSH-217ENST00000592741 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 BRI3O95415 125 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 TSPOP30536 169 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 ZNF575Q86XF7 245 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 GLMPQ8WWB7 406 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 C16orf92Q96LL3 132 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 ST20Q9HBF5 79 aa12.71□□□□□ -0.38
PRKCSH-217ENST00000592741 NDUFA4O00483 81 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 CKS2P33552 79 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 COL5A1-AS1Q5SY13 56 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 MRPS16Q9Y3D3 137 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 HSBP1L1C9JCN9 74 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 PPIFP30405 207 aaKnown RBP12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 C9orf47Q6ZRZ4 202 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 C9orf139Q6ZV77 190 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 SPOCK3Q9BQ16 436 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
PRKCSH-217ENST00000592741 H0Y8G0 127 aa12.69□□□□□ -0.38
PRKCSH-217ENST00000592741 ZNF747Q9BV97 191 aa12.69□□□□□ -0.38
PRKCSH-217ENST00000592741 B4DSR2 109 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 TRBV12-3P01733 135 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 PKD1L2Q7Z442 2459 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 DSCR9P59020 149 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 LINC01545Q5VT33 79 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 UNQ9165/PRO28630Q6UXU0 137 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
PRKCSH-217ENST00000592741 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 NPYP01303 97 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 PF4V1P10720 104 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 IGKV3D-20A0A0C4DH25 116 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 PPBPP02775 128 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 ZNF738Q8NE65 137 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 MSRB1Q9NZV6 116 aa12.67□□□□□ -0.38
PRKCSH-217ENST00000592741 SMAD7O15105 426 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 NCR2O95944 276 aa12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 IGHV3-11P01762 117 aa12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 G0S2P27469 103 aa12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 LOXL1Q08397 574 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 RNF185Q96GF1 192 aa12.66□□□□□ -0.38
PRKCSH-217ENST00000592741 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 A0A096LNJ9 63 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 ZNF25P17030 456 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 GATA3P23771 443 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 BLCAPP62952 87 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 OR4X2Q8NGF9 303 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 MCRIP2Q9BUT9 160 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 C11orf21Q9P2W6 132 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 A0A0G2JLM5 398 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 HBDP02042 147 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
PRKCSH-217ENST00000592741 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms