RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 ORM1P02763 201 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 SEC61GP60059 68 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 PRR20EP86478 221 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 PRR20CP86479 221 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 PRR20DP86480 221 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 PRR20BP86481 221 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 PRR20AP86496 221 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 HRCT1Q6UXD1 115 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 FAM57AQ8TBR7 257 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 CCL13Q99616 98 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 ABCA1O95477 2261 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 IGKV1-16P04430 117 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
SMARCA4-217ENST00000591595 TET2Q6N021 2002 aaPredicted RBP9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 CACNA1HO95180 2353 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 WFDC3Q8IUB2 231 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 C3orf22Q8N5N4 141 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 C4orf26Q17RF5 130 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 C17orf58Q2M2W7 97 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 FLYWCH2Q96CP2 140 aaKnown RBP9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 M0R2P5 195 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 TCL1BO95988 128 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 P01737 135 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 UBE2D3P61077 147 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 UBE2D2P62837 147 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 TRPT1Q86TN4 253 aaKnown RBP9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 FAM216BQ8N7L0 139 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 ZNF71Q9NQZ8 489 aaPredicted RBP9.66□□□□□ -0.86
SMARCA4-217ENST00000591595 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 TRAV2A0A0B4J234 112 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 TRAV17A0A0B4J275 112 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 SHISA9B4DS77 424 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 PEX7O00628 323 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 CD7P09564 240 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 C8orf88P0DMB2 117 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 CT83Q5H943 113 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 RITA1Q96K30 269 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 ASPMQ8IZT6 3477 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 PKDREJQ9NTG1 2253 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 CDX4O14627 284 aaPredicted RBP9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 IGLV1-44P01699 117 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 MAPKAPK5-AS1Q8N8E1 139 aa9.65□□□□□ -0.86
SMARCA4-217ENST00000591595 WI2-2373I1.2A0A1W2PRP0 233 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 PRCDQ00LT1 54 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 RNF7Q9UBF6 113 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 TRAV8-4A0A0B4J246 113 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 HAX1O00165 279 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 UPK2O00526 184 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 COX7A2P2O60397 106 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 EDN2P20800 178 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 SRRM4A7MD48 611 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 PLAUP00749 431 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 IGKCP01834 107 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 CRYGBP07316 175 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 ERHP84090 104 aaKnown RBP9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 GFRA4Q9GZZ7 299 aa9.64□□□□□ -0.87
SMARCA4-217ENST00000591595 BOD1L1Q8NFC6 3051 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 LINC00322Q6ZN03 302 aaPredicted RBP9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 ZNF493Q6ZR52 646 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 PRSS22Q9GZN4 317 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 UQCRQO14949 82 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 PYYP10082 97 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 PDPNQ86YL7 162 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 TRGV9Q99603 122 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 FAM236AA0A1B0GUQ0 79 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 FAM236BA0A1B0GV22 79 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 SLC25A20O43772 301 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 NPYP01303 97 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 ZMAT4Q9H898 229 aa9.63□□□□□ -0.87
SMARCA4-217ENST00000591595 TMEM155Q4W5P6 130 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 MORN5Q5VZ52 161 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 NPIPB3Q92617 1050 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 CD69Q07108 199 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 DEFB109BQ30KR1 87 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 PRO3102Q9H379 93 aa9.62□□□□□ -0.87
SMARCA4-217ENST00000591595 CCL8P80075 99 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 Q8N1Y9 231 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 DEFB123Q8N688 67 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 OR11H6Q8NGC7 330 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 TNRC18O15417 2968 aaPredicted RBP9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
SMARCA4-217ENST00000591595 PCNX1Q96RV3 2341 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms