RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SHANK2-AS3Q9BTD1 123 aa10.94□□□□□ -0.66
DDX39A-216ENST00000591275 PARD6GQ9BYG4 376 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-216ENST00000591275 PGPEP1Q9NXJ5 209 aa10.94□□□□□ -0.66
DDX39A-216ENST00000591275 H7BYZ3 331 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 WRBO00258 174 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 RPL7P18124 248 aaKnown RBP10.93□□□□□ -0.66
DDX39A-216ENST00000591275 TAS2R30P59541 319 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 RPUSD4Q96CM3 377 aaKnown RBP10.93□□□□□ -0.66
DDX39A-216ENST00000591275 SLC25A31Q9H0C2 315 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 CYTL1Q9NRR1 136 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 HIGD1AQ9Y241 93 aa10.93□□□□□ -0.66
DDX39A-216ENST00000591275 S100A10P60903 97 aa10.92□□□□□ -0.66
DDX39A-216ENST00000591275 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
DDX39A-216ENST00000591275 ZNF471Q9BX82 626 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-216ENST00000591275 TMPRSS5Q9H3S3 457 aa10.92□□□□□ -0.66
DDX39A-216ENST00000591275 TNFRSF18Q9Y5U5 241 aa10.92□□□□□ -0.66
DDX39A-216ENST00000591275 VPS13BQ7Z7G8 4022 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 A0A096LPF7 62 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 SMCO3A2RU48 225 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 H3BNG1 76 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 H3BP45 60 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 EREGO14944 169 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 HYPMO75409 117 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
DDX39A-216ENST00000591275 OR5G3P0C626 314 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 KRTAP10-1P60331 282 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 ERVFC1-1P60608 527 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 RPP30P78346 268 aaKnown RBP10.91□□□□□ -0.66
DDX39A-216ENST00000591275 SPANXN5Q5MJ07 72 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 CYP2G1PQ6ZSU1 146 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 ARV1Q9H2C2 271 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 MDFICQ9P1T7 246 aa10.91□□□□□ -0.66
DDX39A-216ENST00000591275 LSM5Q9Y4Y9 91 aaKnown RBP10.91□□□□□ -0.66
DDX39A-216ENST00000591275 A0A087X0K7 114 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 SNURFLB1AK76 121 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 J3KRW8 73 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 SYNGR2O43760 224 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 MED6O75586 246 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 NMBP08949 121 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 SNRPCP09234 159 aaKnown RBP10.9□□□□□ -0.66
DDX39A-216ENST00000591275 LINC00869P0C866 280 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 BAXQ07812 192 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 GFI1BQ5VTD9 330 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 VSIG2Q96IQ7 327 aa10.9□□□□□ -0.66
DDX39A-216ENST00000591275 CIB3Q96Q77 187 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-216ENST00000591275 LYRM2Q9NU23 88 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-216ENST00000591275 SIVA1O15304 175 aa10.89□□□□□ -0.67
DDX39A-216ENST00000591275 CDPF1Q6NVV7 123 aa10.89□□□□□ -0.67
DDX39A-216ENST00000591275 Q6ZTI0 123 aa10.89□□□□□ -0.67
DDX39A-216ENST00000591275 EIF4E3Q8N5X7 224 aaKnown RBP10.89□□□□□ -0.67
DDX39A-216ENST00000591275 SAT2Q96F10 170 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-216ENST00000591275 SMIM8Q96KF7 97 aa10.89□□□□□ -0.67
DDX39A-216ENST00000591275 C20orf144Q9BQM9 153 aa10.89□□□□□ -0.67
DDX39A-216ENST00000591275 RCL1Q9Y2P8 373 aaKnown RBP10.89□□□□□ -0.67
DDX39A-216ENST00000591275 BORCS7-ASMTA0A0B4J1R7 106 aa10.88□□□□□ -0.67
DDX39A-216ENST00000591275 PMS2P5A8MQ11 134 aa10.88□□□□□ -0.67
DDX39A-216ENST00000591275 VAMP2P63027 116 aa10.88□□□□□ -0.67
DDX39A-216ENST00000591275 ALKAL2Q6UX46 152 aa10.88□□□□□ -0.67
DDX39A-216ENST00000591275 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
DDX39A-216ENST00000591275 PRAC2D3DTV9 90 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 NXPH4O95158 308 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 SCGB1D2O95969 90 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 IFNA5P01569 189 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 SEC11BP0C7V7 166 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 PATE2Q6UY27 113 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 C18orf15Q96N68 181 aa10.87□□□□□ -0.67
DDX39A-216ENST00000591275 TRAV12-3A0A0B4J271 114 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 H3BTX0 84 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 MRPS12O15235 138 aaKnown RBP10.86□□□□□ -0.67
DDX39A-216ENST00000591275 RAB5CP51148 216 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 PLP1P60201 277 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 POLR2GP62487 172 aaKnown RBP eCLIP10.86□□□□□ -0.67
DDX39A-216ENST00000591275 HAMPP81172 84 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 ZNF266Q14584 549 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 ICAM4Q14773 271 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 TMEM252Q8N6L7 170 aa10.86□□□□□ -0.67
DDX39A-216ENST00000591275 ZNF331Q9NQX6 463 aaPredicted RBP10.86□□□□□ -0.67
DDX39A-216ENST00000591275 TRGV2A0A075B6R0 118 aa10.85□□□□□ -0.67
DDX39A-216ENST00000591275 A0A087WTM6 91 aa10.85□□□□□ -0.67
DDX39A-216ENST00000591275 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
DDX39A-216ENST00000591275 LCN15Q6UWW0 184 aa10.85□□□□□ -0.67
DDX39A-216ENST00000591275 SLC17A3O00476 420 aa10.84□□□□□ -0.67
DDX39A-216ENST00000591275 SULT1A1P50225 295 aa10.84□□□□□ -0.67
DDX39A-216ENST00000591275 SELENOTP62341 195 aa10.84□□□□□ -0.67
DDX39A-216ENST00000591275 DAZ2Q13117 558 aaKnown RBP10.84□□□□□ -0.67
DDX39A-216ENST00000591275 RPL7L1Q6DKI1 246 aaKnown RBP10.84□□□□□ -0.67
DDX39A-216ENST00000591275 SLC50A1Q9BRV3 221 aa10.84□□□□□ -0.67
DDX39A-216ENST00000591275 GSN-AS1Q9NRJ2 163 aa10.84□□□□□ -0.67
DDX39A-216ENST00000591275 RAB19A4D1S5 217 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 FAM24AA6NFZ4 105 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 SULT1A2P50226 295 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 NHLH2Q02577 135 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 ATP6V1FQ16864 119 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 STX12Q86Y82 276 aa10.83□□□□□ -0.68
DDX39A-216ENST00000591275 TRGV1A0A0A0MS02 117 aa10.82□□□□□ -0.68
DDX39A-216ENST00000591275 SSSCA1O60232 199 aa10.82□□□□□ -0.68
DDX39A-216ENST00000591275 LEPP41159 167 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms