RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 PITX3O75364 302 aa8.42□□□□□ -1.06
LSM12-203ENST00000590563 PFN1P07737 140 aaKnown RBP8.42□□□□□ -1.06
LSM12-203ENST00000590563 ARL6Q9H0F7 186 aa8.42□□□□□ -1.06
LSM12-203ENST00000590563 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
LSM12-203ENST00000590563 C14orf166Q9Y224 244 aaKnown RBP8.42□□□□□ -1.06
LSM12-203ENST00000590563 IGKV2D-24A0A075B6R9 120 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 TRAV8-1A0A0A6YYK1 113 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 A0A0B4J2A0 478 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 M0R3E3 92 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 TBPP20226 339 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 TOR2AQ5JU69 321 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 CRCT1Q9UGL9 99 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 SHPKQ9UHJ6 478 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 BLOC1S6Q9UL45 172 aa8.41□□□□□ -1.06
LSM12-203ENST00000590563 GGTLC3B5MD39 225 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 GPX1P07203 203 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 AKR1C4P17516 323 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.06
LSM12-203ENST00000590563 FFAR4Q5NUL3 377 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 FAAP20Q6NZ36 180 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 LINC00305Q7Z4B0 112 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 BPIFA4PQ86YQ2 179 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 SLC25A29Q8N8R3 303 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 OR4C5Q8NGB2 326 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 GTSF1LQ9H1H1 148 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 GPR132Q9UNW8 380 aa8.4□□□□□ -1.06
LSM12-203ENST00000590563 RPS19P39019 145 aaKnown RBP8.39□□□□□ -1.07
LSM12-203ENST00000590563 GABARAPL2P60520 117 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 CROCCP3Q8IVE0 287 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 NRG4Q8WWG1 115 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 RMI2Q96E14 147 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
LSM12-203ENST00000590563 K7EPK0 472 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 NMBP08949 121 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 SELENOTP62341 195 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 ATRAIDQ6UW56 229 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
LSM12-203ENST00000590563 SPXQ9BT56 116 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 MTFP1Q9UDX5 166 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 KIF25-AS1Q9Y6Z4 181 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 FSIP2Q5CZC0 6907 aa8.38□□□□□ -1.07
LSM12-203ENST00000590563 SMCO3A2RU48 225 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 H3BP45 60 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 PHOX2AO14813 284 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 RAB3DO95716 219 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 APOA1P02647 267 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
LSM12-203ENST00000590563 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 S100A7AQ86SG5 101 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 RNF24Q9Y225 148 aa8.37□□□□□ -1.07
LSM12-203ENST00000590563 SMIM31A0A1B0GVY4 71 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 FABP12A6NFH5 140 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 SLC38A11Q08AI6 406 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 VWC2Q2TAL6 325 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 TMEM229BQ8NBD8 167 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 CNBD2Q96M20 576 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 SRRQ9GZT4 340 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 COMMD3Q9UBI1 195 aa8.36□□□□□ -1.07
LSM12-203ENST00000590563 IGKV2-40A0A087WW87 121 aaPredicted RBP8.35□□□□□ -1.07
LSM12-203ENST00000590563 WRBO00258 174 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 ZNF253O75346 499 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 IGKV2D-40P01614 121 aaPredicted RBP8.35□□□□□ -1.07
LSM12-203ENST00000590563 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 RHOHQ15669 191 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 TMEM183BQ1AE95 376 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 SPANXN5Q5MJ07 72 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 TMEM183AQ8IXX5 376 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 OR51S1Q8NGJ8 323 aa8.35□□□□□ -1.07
LSM12-203ENST00000590563 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 SYNGR2O43760 224 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 NDUFB4O95168 129 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 PRSS1P07477 247 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 TAS2R19P59542 299 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.07
LSM12-203ENST00000590563 RPP30P78346 268 aaKnown RBP8.34□□□□□ -1.07
LSM12-203ENST00000590563 GUK1Q16774 197 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 CIB3Q96Q77 187 aaPredicted RBP8.34□□□□□ -1.07
LSM12-203ENST00000590563 PRADC1Q9BSG0 188 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 ZNF492Q9P255 531 aa8.34□□□□□ -1.07
LSM12-203ENST00000590563 A0A087WYN8 130 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 FBLL1A6NHQ2 334 aaKnown RBP8.33□□□□□ -1.08
LSM12-203ENST00000590563 M0R2P5 195 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 HPGDSO60760 199 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 OR10J4P0C629 311 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
LSM12-203ENST00000590563 BAK1Q16611 211 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 ZC2HC1AQ96GY0 325 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 KLK12Q9UKR0 248 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
LSM12-203ENST00000590563 TRGV11A0A075B6L2 103 aa8.32□□□□□ -1.08
LSM12-203ENST00000590563 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
LSM12-203ENST00000590563 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
LSM12-203ENST00000590563 MED6O75586 246 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms